About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides04002ENDONUCLEASE-RELATED
Paelopatides04003-
Paelopatides04004EPM2A-INTERACTING PROTEIN 1
Paelopatides04005-
Paelopatides04006PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED
Paelopatides04007CYTOKINE RECEPTOR
Paelopatides04008GABA-B RECEPTOR
Paelopatides04009-
Paelopatides04010SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides04011MATING RESPONSE PROTEIN POI2
Paelopatides04012UNCHARACTERIZED
Paelopatides04013ENDONUCLEASE-RELATED
Paelopatides04014ENDONUCLEASE-RELATED
Paelopatides04015GREB1-RELATED
Paelopatides04016GREB1-RELATED
Paelopatides04017-
Paelopatides04018REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides04019REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides04020REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides04021CENTROSOMAL PROTEIN 2
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