About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_000944-T1
OS493_000945-T1PROPERDIN
OS493_000946-T1
OS493_000947-T1
OS493_000948-T1
OS493_000949-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_000950-T1METABOTROPIC GLUTAMATE RECEPTOR
OS493_000951-T1NUCLEOPROTEIN TPR-RELATED
OS493_000952-T1NUCLEOPROTEIN TPR-RELATED
OS493_000953-T1NUCLEOPROTEIN TPR-RELATED
OS493_000954-T1
OS493_000955-T1
OS493_000956-T1CDK5 AND ABL1 ENZYME SUBSTRATE 1
OS493_000957-T1PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE
OS493_000958-T1DUF614 FAMILY PROTEIN-RELATED
OS493_000959-T1SOWAH (DROSOPHILA) HOMOLOG
OS493_000960-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
OS493_000961-T1
OS493_000962-T1PROTEASE M1 ZINC METALLOPROTEASE
OS493_000963-T1GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1
OS493_000964-T1GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1
OS493_000965-T1ADIPOGENESIS REGULATORY FACTOR
OS493_000966-T1PROLINE OXIDASE
OS493_000967-T1PROLINE OXIDASE
OS493_000968-T1
OS493_000969-T1
OS493_000970-T1CLOCK-INTERACTING PACEMAKER
OS493_000971-T1
OS493_000972-T1
OS493_000973-T1HEME-BINDING PROTEIN-RELATED
OS493_000974-T1
OS493_000976-T1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
OS493_000977-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_000978-T1GAMMA GLUTAMYL TRANSPEPTIDASE
OS493_000979-T1PUTATIVE GLUTATHIONE HYDROLASE LIGHT CHAIN
OS493_000980-T1GAMMA GLUTAMYL TRANSPEPTIDASE
OS493_000981-T1GAMMA GLUTAMYL TRANSPEPTIDASE
OS493_000982-T1PUTATIVE GLUTATHIONE HYDROLASE LIGHT CHAIN
OS493_000984-T1GAMMA GLUTAMYL TRANSPEPTIDASE
OS493_000985-T1
OS493_000986-T1GAMMA GLUTAMYL TRANSPEPTIDASE
OS493_000987-T1
OS493_000988-T1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
OS493_000989-T1
OS493_000990-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_000991-T1GAMMA GLUTAMYL TRANSPEPTIDASE
OS493_000992-T1GAMMA GLUTAMYL TRANSPEPTIDASE
OS493_000993-T1GAMMA GLUTAMYL TRANSPEPTIDASE
OS493_000994-T1GAMMA GLUTAMYL TRANSPEPTIDASE
OS493_000995-T1GAMMA GLUTAMYL TRANSPEPTIDASE
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