About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_000633-T1
OS493_000634-T1
OS493_000635-T1
OS493_000636-T1
OS493_000637-T1
OS493_000638-T1
OS493_000639-T1THAP DOMAIN PROTEIN
OS493_000640-T1EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
OS493_000641-T1
OS493_000642-T1APONTIC
OS493_000643-T1
OS493_000644-T1
OS493_000645-T1
OS493_000646-T1
OS493_000647-T1
OS493_000648-T1
OS493_000649-T1
OS493_000650-T1EXPRESSED PROTEIN
OS493_000651-T1
OS493_000652-T1
OS493_000653-T1
OS493_000654-T1
OS493_000655-T1
OS493_000656-T1
OS493_000657-T1
OS493_000658-T1
OS493_000660-T1
OS493_000661-T1
OS493_000662-T1
OS493_000663-T1
OS493_000664-T1EXPRESSED PROTEIN
OS493_000665-T1
OS493_000666-T1
OS493_000667-T1
OS493_000668-T1
OS493_000669-T1PHD-TYPE DOMAIN-CONTAINING PROTEIN
OS493_000670-T1
OS493_000671-T1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
OS493_000672-T1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
OS493_000673-T1SKI ONCOGENE-RELATED
OS493_000674-T1CENTROSOMAL PROTEIN OF 19K CEP19
OS493_000675-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 22
OS493_000676-T1
OS493_000677-T1CALCIUM HOMEOSTASIS MODULATOR PROTEIN
OS493_000678-T1ADIPOLIN
OS493_000679-T1
OS493_000680-T1
OS493_000681-T1EXPRESSED PROTEIN
OS493_000682-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_000683-T1
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