About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_000890-T1
OS493_000891-T1IONOTROPIC GLUTAMATE RECEPTOR
OS493_000893-T1
OS493_000895-T1CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN
OS493_000896-T1
OS493_000897-T1
OS493_000898-T1
OS493_000900-T1
OS493_000901-T1
OS493_000902-T1
OS493_000903-T1
OS493_000904-T1
OS493_000905-T1
OS493_000906-T1
OS493_000907-T1
OS493_000908-T1
OS493_000909-T1
OS493_000910-T1DNA HELICASE RECQ FAMILY MEMBER
OS493_000911-T1
OS493_000912-T1
OS493_000913-T1
OS493_000914-T1
OS493_000915-T1
OS493_000916-T1
OS493_000917-T1
OS493_000918-T1
OS493_000919-T1
OS493_000920-T1
OS493_000921-T1SERINE-THREONINE PROTEIN KINASE
OS493_000922-T1
OS493_000923-T1
OS493_000924-T1
OS493_000925-T1
OS493_000926-T1
OS493_000927-T1
OS493_000928-T1
OS493_000929-T1
OS493_000930-T1AQUAPORIN TRANSPORTER
OS493_000932-T1HAUS AUGMIN-LIKE COMPLEX SUBUNIT 7
OS493_000933-T1WASH COMPLEX SUBUNIT 5
OS493_000934-T150S RIBOSOMAL PROTEIN L15
OS493_000935-T1DNA-BINDING PROTEIN INHIBITOR
OS493_000936-T1MICROCEPHALIN
OS493_000937-T1
OS493_000938-T1MICROCEPHALIN
OS493_000939-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
OS493_000940-T1
OS493_000941-T1HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
OS493_000942-T1
OS493_000943-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
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