About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS09351SHORT TRANSMEMBRANE MITOCHONDRIAL PROTEIN 1
HS09352DYNAMIN
HS09353TROPONIN T
HS09354CALDESMON
HS09355SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
HS09356DEDICATOR OF CYTOKINESIS
HS09357INTERFERON-RELATED DEVELOPMENTAL REGULATOR
HS09358TRANSMEMBRANE PROTEIN 168
HS09359G PROTEIN-COUPLED RECEPTOR
HS09360
HS09361PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT
HS09362FORKHEAD BOX P, ISOFORM C
HS09363FORKHEAD BOX P, ISOFORM C
HS09364
HS09365ALDO/KETO REDUCTASE
HS09366MIP04163P
HS09367DNAJ HOMOLOG SUBFAMILY B MEMBER 9
HS09368AGAP005574-PA
HS09369A-KINASE ANCHOR PROTEIN 14
HS09370CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA
HS09371PROTEIN SIDEKICK
HS09372PROTEIN SIDEKICK
HS09373PDZ DOMAIN CONTAINING RING FINGER PROTEIN 3, 4
HS09374IP22168P
HS09375PERIPHILIN 1
HS09376RYBP AND YAF2-RELATED
HS09377ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1
HS09378LIM DOMAIN-CONTAINING PROTEIN
HS09379TRNA PSEUDOURIDINE SYNTHASE D
HS09380TETRASPANIN
HS09381TETRASPANIN
HS09382DRAB11-RELATED
HS09383SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
HS09384FIBRINOGEN/TENASCIN/ANGIOPOEITIN
HS09385NICOTINAMIDE PHOSPHORIBOSYLTRANSFERASE
HS09386GAMMA-SECRETASE-ACTIVATING PROTEIN
HS09387SYNAPTOPHYSIN
HS09388ATAXIN 7 RELATED
HS09389ATAXIN 7 RELATED
HS09390UNCHARACTERIZED
HS09391METABOTROPIC GLUTAMATE RECEPTOR
HS09392C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED
HS09393PROSAPOSIN RECEPTOR GPR37 FAMILY MEMBER
HS09394HISTONE H4
HS09395TRANSMEMBRANE PROTEIN 229 FAMILY MEMBER
HS09396HYALURONIDASE
HS09397SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
HS09398TROPOMODULIN
HS09399KIT LIGAND
HS09400ZINC FINGER PROTEIN
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