About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_27203-0.29CEREBELLIN-RELATED
Bpl_scaf_27203-0.7-
Bpl_scaf_27206-0.0
Bpl_scaf_27206-0.16
Bpl_scaf_27206-0.20
Bpl_scaf_27206-0.21
Bpl_scaf_27206-0.23
Bpl_scaf_27206-0.4
Bpl_scaf_27206-0.6
Bpl_scaf_27215-0.15ANKYRIN REPEAT FAMILY PROTEIN
Bpl_scaf_27215-0.16-
Bpl_scaf_27215-0.24CENTROMERE PROTEIN E
Bpl_scaf_27216-0.1
Bpl_scaf_27216-0.2
Bpl_scaf_27216-0.7
Bpl_scaf_27216-1.11
Bpl_scaf_27216-1.12
Bpl_scaf_27216-1.2
Bpl_scaf_27216-1.4
Bpl_scaf_27216-2.10GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
Bpl_scaf_27216-2.11CHROMOSOME 19 C19ORF81 HOMOLOG
Bpl_scaf_27216-3.0
Bpl_scaf_27216-3.13CYTOKINE RECEPTOR
Bpl_scaf_27216-4.11POLYPHOSPHOINOSITIDE PHOSPHATASE
Bpl_scaf_27216-4.19SYNAPTOBREVIN HOMOLOG YKT6
Bpl_scaf_27216-4.20
Bpl_scaf_27216-5.3-
Bpl_scaf_27216-6.10WD-REPEATCONTAINING PROTEIN WDR1
Bpl_scaf_27216-6.8RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Bpl_scaf_27216-6.9NXPE FAMILY MEMBER
Bpl_scaf_27216-7.11
Bpl_scaf_27216-7.12
Bpl_scaf_27216-7.2
Bpl_scaf_27216-7.4
Bpl_scaf_2722-0.0
Bpl_scaf_2722-0.1
Bpl_scaf_2722-0.3
Bpl_scaf_2722-0.5
Bpl_scaf_27224-0.12PHYTANOYL-COA DIOXYGENASE-RELATED-RELATED
Bpl_scaf_27224-0.23
Bpl_scaf_27224-0.24
Bpl_scaf_27224-0.3PHYTANOYL-COA DIOXYGENASE-RELATED-RELATED
Bpl_scaf_27224-0.4PHYTANOYL-COA DIOXYGENASE-RELATED-RELATED
Bpl_scaf_2723-0.11
Bpl_scaf_2723-0.6WD-40 REPEAT PROTEIN
Bpl_scaf_2723-1.13PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1
Bpl_scaf_2723-1.57FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_2723-1.58PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
Bpl_scaf_2723-1.6NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_2723-1.7TUBULIN FOLDING COFACTOR C
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