About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_26746-3.1
Bpl_scaf_26749-0.0
Bpl_scaf_26754-0.0
Bpl_scaf_26755-0.1
Bpl_scaf_26757-0.3DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_26757-1.10
Bpl_scaf_26757-1.4
Bpl_scaf_26757-1.9
Bpl_scaf_26757-3.10CENTROSOME-ASSOCIATED PROTEIN 350
Bpl_scaf_26757-3.20GLUTAMINE SYNTHETASE
Bpl_scaf_26757-3.8HOMOSERINE O-ACETYLTRANSFERASE
Bpl_scaf_26759-0.2N-ACETYLTRANSFERASE 9
Bpl_scaf_26764-0.0
Bpl_scaf_26766-0.1
Bpl_scaf_26767-0.0
Bpl_scaf_26767-0.12F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_26767-0.2
Bpl_scaf_26767-0.7BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_26767-1.10
Bpl_scaf_26767-1.5OSJNBA0004B13.7 PROTEIN
Bpl_scaf_2677-0.20
Bpl_scaf_2677-0.21
Bpl_scaf_2677-0.22
Bpl_scaf_268-0.0HEPARANASE
Bpl_scaf_268-1.11MALE FERTILITY FACTOR KL5
Bpl_scaf_268-2.5PHD-TYPE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_268-3.0
Bpl_scaf_268-3.6NUCLEAR HORMONE RECEPTOR FAMILY MEMBER NHR-86-RELATED
Bpl_scaf_268-5.10
Bpl_scaf_268-5.8ANKYRIN REPEAT FAMILY PROTEIN
Bpl_scaf_268-5.9COLLAGEN ALPHA
Bpl_scaf_26800-0.1
Bpl_scaf_26800-0.3
Bpl_scaf_26819-0.4CRUMBS FAMILY MEMBER
Bpl_scaf_2683-0.10SCAVENGER RECEPTOR CLASS F
Bpl_scaf_2683-0.13SCAVENGER RECEPTOR CLASS F
Bpl_scaf_2683-0.15SCAVENGER RECEPTOR CLASS F
Bpl_scaf_26853-0.0
Bpl_scaf_26872-0.3
Bpl_scaf_26872-0.6
Bpl_scaf_26873-0.0
Bpl_scaf_26873-0.6EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Bpl_scaf_26882-0.5
Bpl_scaf_26888-0.1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_26888-0.2
Bpl_scaf_26888-0.9
Bpl_scaf_2691-0.7
Bpl_scaf_26916-0.1
Bpl_scaf_2692-0.1
Bpl_scaf_2692-0.7BONUS, ISOFORM C-RELATED
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