About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_26227-0.1
Bpl_scaf_26227-0.11
Bpl_scaf_26227-0.4
Bpl_scaf_26228-1.2RAN BINDING PROTEIN 9-RELATED
Bpl_scaf_26228-2.10FI04035P
Bpl_scaf_26228-2.11UNCHARACTERIZED
Bpl_scaf_26228-2.9
Bpl_scaf_26228-3.10
Bpl_scaf_26228-3.7WD40 REPEAT PROTEIN
Bpl_scaf_26228-4.5CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Bpl_scaf_26228-5.16PROTEIN DISPATCHED-RELATED
Bpl_scaf_26228-5.21REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_26228-5.24
Bpl_scaf_26228-5.25
Bpl_scaf_26228-5.26
Bpl_scaf_26228-5.3
Bpl_scaf_26228-5.6COLLAGEN ALPHA
Bpl_scaf_26229-0.0DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_26239-0.0
Bpl_scaf_2624-0.1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_26250-0.0
Bpl_scaf_26250-0.2
Bpl_scaf_26250-0.3
Bpl_scaf_26250-0.5PROTEIN CBG17840
Bpl_scaf_26269-0.15OS10G0105400 PROTEIN
Bpl_scaf_26269-0.18
Bpl_scaf_26269-0.24
Bpl_scaf_2628-0.2
Bpl_scaf_2628-0.3
Bpl_scaf_26282-0.5NOTCH LIGAND FAMILY MEMBER
Bpl_scaf_26282-0.6NOTCH LIGAND FAMILY MEMBER
Bpl_scaf_26297-0.0
Bpl_scaf_26297-0.6SLEI FAMILY PROTEIN
Bpl_scaf_26316-0.2TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_26316-0.3
Bpl_scaf_26321-0.21NG37
Bpl_scaf_26321-0.23DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_26330-0.0TOLL-LIKE RECEPTOR
Bpl_scaf_26330-0.1TOLL-LIKE RECEPTOR
Bpl_scaf_26339-0.12SUPEROXIDE DISMUTASE CU-ZN -RELATED
Bpl_scaf_26339-0.9SIMILAR TO RIKEN CDNA 6430571L13 GENE, SIMILAR TO G20 PROTEIN
Bpl_scaf_26352-0.1PESCADILLO - RELATED
Bpl_scaf_26355-0.14FOLATE RECEPTOR
Bpl_scaf_26355-0.17NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT
Bpl_scaf_26355-0.19CAMK FAMILY PROTEIN KINASE
Bpl_scaf_26355-0.20CAMK FAMILY PROTEIN KINASE
Bpl_scaf_26364-0.10STAR-RELATED LIPID TRANSFER PROTEIN 9
Bpl_scaf_26364-0.9
Bpl_scaf_2637-0.2
Bpl_scaf_26374-0.0SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
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