About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_25712-1.22PRESENILIN
Bpl_scaf_25712-1.23VACUOLAR PROTEIN SORTING 54
Bpl_scaf_25712-1.33CEREBELLIN-RELATED
Bpl_scaf_25721-0.0
Bpl_scaf_25729-0.460 KDA RIBONUCLEOPROTEIN SSA/RO
Bpl_scaf_25729-1.3INTRACELLULAR TRAFFIC PROTEIN-RELATED
Bpl_scaf_25729-1.7ZINC FINGER PROTEIN
Bpl_scaf_25729-2.12HEAT SHOCK 70 KDA PROTEIN 14
Bpl_scaf_25729-2.15
Bpl_scaf_25729-2.23
Bpl_scaf_25730-0.5SCAVENGER RECEPTOR CLASS F
Bpl_scaf_25739-0.2
Bpl_scaf_25741-0.0
Bpl_scaf_25742-0.2SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_25745-0.0
Bpl_scaf_25745-1.10SPERMATOGENESIS-ASSOCIATED SERINE-RICH PROTEIN 1
Bpl_scaf_25745-1.11SUGAR HYDROLASE-RELATED
Bpl_scaf_25745-1.12SUGAR HYDROLASE-RELATED
Bpl_scaf_25745-1.5
Bpl_scaf_25745-2.11PROTEIN ATP6V1FNB-LIKE
Bpl_scaf_25745-2.12
Bpl_scaf_25745-2.16UNCHARACTERIZED
Bpl_scaf_25745-2.24
Bpl_scaf_25745-2.5SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Bpl_scaf_25745-2.6SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Bpl_scaf_25745-2.7SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Bpl_scaf_25747-0.0FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_25750-0.0
Bpl_scaf_25756-0.3
Bpl_scaf_25756-0.4
Bpl_scaf_25756-1.10ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_25756-1.11
Bpl_scaf_25756-1.37DNA POLYMERASE ALPHA CATALYTIC SUBUNIT
Bpl_scaf_25756-1.38DNA POLYMERASE ALPHA CATALYTIC SUBUNIT
Bpl_scaf_25756-1.40TUBULIN
Bpl_scaf_25756-2.12
Bpl_scaf_25756-2.2
Bpl_scaf_25756-2.6LONG-CHAIN-FATTY-ACID--COA LIGASE
Bpl_scaf_25760-0.1FUSELESS, ISOFORM A
Bpl_scaf_25764-0.0
Bpl_scaf_25766-0.2
Bpl_scaf_25766-0.5
Bpl_scaf_25766-0.6
Bpl_scaf_25766-0.8
Bpl_scaf_25766-1.4
Bpl_scaf_25766-2.12
Bpl_scaf_25766-2.6
Bpl_scaf_25767-0.11UNCHARACTERIZED
Bpl_scaf_25767-0.3ATP SYNTHASE EPSILON CHAIN, MITOCHONDRIAL
Bpl_scaf_25767-0.7FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE
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