About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_25456-0.14
Bpl_scaf_25456-0.9
Bpl_scaf_25464-0.8
Bpl_scaf_25464-0.9
Bpl_scaf_25479-0.2
Bpl_scaf_25480-0.5SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG
Bpl_scaf_25480-0.8
Bpl_scaf_25489-0.25CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Bpl_scaf_25498-0.16TRYPSIN-RELATED
Bpl_scaf_25498-0.17
Bpl_scaf_25498-0.3
Bpl_scaf_25513-0.2THIOESTERASE
Bpl_scaf_25513-0.7CHITIN SYNTHASE
Bpl_scaf_25524-0.5ATP-BINDING CASSETTE SUB-FAMILY C
Bpl_scaf_25525-0.3PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Bpl_scaf_25525-0.5
Bpl_scaf_25525-1.10
Bpl_scaf_25525-1.24PHEROMONE SHUTDOWN PROTEIN
Bpl_scaf_25525-1.8T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Bpl_scaf_25525-1.9
Bpl_scaf_25525-2.13DEATH DOMAIN-CONTAINING PROTEIN CRADD
Bpl_scaf_25525-2.14PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_25525-2.4
Bpl_scaf_25525-4.1KRAB AND ZINC FINGER DOMAIN-CONTAINING
Bpl_scaf_25525-4.7CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_25525-4.8INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
Bpl_scaf_25525-5.3
Bpl_scaf_25525-6.05-HYDROXYTRYPTAMINE RECEPTOR
Bpl_scaf_2553-0.0
Bpl_scaf_25531-0.0
Bpl_scaf_25531-0.1
Bpl_scaf_25531-0.11
Bpl_scaf_25531-0.13GLUTATHIONE S-TRANSFERASE-RELATED
Bpl_scaf_25531-0.15GLUTATHIONE S-TRANSFERASE RHO
Bpl_scaf_25531-0.2
Bpl_scaf_25543-0.0
Bpl_scaf_25543-0.7
Bpl_scaf_25563-0.0
Bpl_scaf_25563-0.1
Bpl_scaf_25563-0.3BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_25582-0.16
Bpl_scaf_25582-0.2
Bpl_scaf_25582-0.9USP DOMAIN-CONTAINING PROTEIN
Bpl_scaf_25592-0.10WD REPEAT DOMAIN 9
Bpl_scaf_25592-0.4
Bpl_scaf_25592-0.5
Bpl_scaf_25595-0.0
Bpl_scaf_25595-0.11ZINC FINGER PROTEIN 385B-LIKE
Bpl_scaf_25595-0.14
Bpl_scaf_25595-0.17SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
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