About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_26452-2.13WD-REPEAT PROTEIN-RELATED
Bpl_scaf_26452-2.5GALACTOSE-3-O-SULFOTRANSFERASE
Bpl_scaf_26452-2.9GALACTOSE-3-O-SULFOTRANSFERASE
Bpl_scaf_26452-3.10HISTONE PARYLATION FACTOR 1
Bpl_scaf_26452-3.11ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE
Bpl_scaf_26452-3.9CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Bpl_scaf_26452-4.1AMINO ACID TRANSPORTER
Bpl_scaf_26452-5.0
Bpl_scaf_26452-5.1
Bpl_scaf_26452-5.7
Bpl_scaf_26452-7.10PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_26452-7.16POLY [ADP-RIBOSE] POLYMERASE
Bpl_scaf_26453-0.5
Bpl_scaf_26458-0.18
Bpl_scaf_26458-0.19
Bpl_scaf_26458-0.20RHO FAMILY GTPASE
Bpl_scaf_26458-1.10XANTHINE DEHYDROGENASE
Bpl_scaf_26465-0.0OXIDASE/PEROXIDASE
Bpl_scaf_26467-0.1UNCHARACTERIZED
Bpl_scaf_26475-0.15
Bpl_scaf_26475-0.20
Bpl_scaf_26475-1.16
Bpl_scaf_26475-1.17
Bpl_scaf_26475-1.18
Bpl_scaf_26475-1.8UNCHARACTERIZED
Bpl_scaf_26481-0.1
Bpl_scaf_26490-0.4ARSENITE-RESISTANCE PROTEIN 2
Bpl_scaf_26490-1.11TRANSCRIPTION FACTOR E2F
Bpl_scaf_26490-1.12ARSENITE-RESISTANCE PROTEIN 2
Bpl_scaf_26490-1.7
Bpl_scaf_26490-1.8
Bpl_scaf_26499-0.0
Bpl_scaf_26503-1.0
Bpl_scaf_26503-1.19NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_26503-1.8NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Bpl_scaf_26509-0.6CYTOCHROME P450 FAMILY 4
Bpl_scaf_26509-0.7CYTOCHROME P450 FAMILY 4
Bpl_scaf_26509-1.16CYTOCHROME P450 FAMILY 4
Bpl_scaf_26509-1.3
Bpl_scaf_26509-1.32
Bpl_scaf_26509-1.33
Bpl_scaf_26509-1.34
Bpl_scaf_26510-0.8
Bpl_scaf_26510-1.15MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
Bpl_scaf_26510-1.4MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
Bpl_scaf_26510-4.105'-NUCLEOTIDASE
Bpl_scaf_26510-4.1260S RIBOSOMAL PROTEIN L35
Bpl_scaf_26510-4.13ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC
Bpl_scaf_26510-4.15
Bpl_scaf_26510-5.6CYTOCHROME P450 508A4-RELATED
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