About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_008833-T1
LLU|FUN_008834-T1UNCHARACTERIZED
LLU|FUN_008835-T1PIEZO-TYPE MECHANOSENSITIVE ION CHANNEL HOMOLOG
LLU|FUN_008836-T1
LLU|FUN_008837-T1MULTICOPPER OXIDASE-RELATED
LLU|FUN_008838-T1EPHRIN TYPE-B RECEPTOR
LLU|FUN_008839-T1EPHRIN TYPE-B RECEPTOR
LLU|FUN_008840-T1
LLU|FUN_008841-T1CADHERIN-23
LLU|FUN_008842-T1ATP-DEPENDENT (S)-NAD(P)H-HYDRATE DEHYDRATASE FAMILY MEMBER
LLU|FUN_008843-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 138
LLU|FUN_008844-T1
LLU|FUN_008845-T1
LLU|FUN_008846-T1
LLU|FUN_008847-T1
LLU|FUN_008848-T1HISTONE H1
LLU|FUN_008849-T1HISTONE H1
LLU|FUN_008850-T1
LLU|FUN_008851-T1
LLU|FUN_008852-T1
LLU|FUN_008853-T1PEPTIDYL-TRNA HYDROLASE
LLU|FUN_008854-T1SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER
LLU|FUN_008855-T1UNCHARACTERIZED
LLU|FUN_008856-T1ANKYRIN REPEAT-CONTAINING
LLU|FUN_008857-T1
LLU|FUN_008858-T1DEAD-BOX ATP-DEPENDENT RNA HELICASE 50
LLU|FUN_008859-T1
LLU|FUN_008860-T1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
LLU|FUN_008861-T1
LLU|FUN_008862-T1
LLU|FUN_008863-T1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
LLU|FUN_008864-T1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
LLU|FUN_008865-T1
LLU|FUN_008866-T1
LLU|FUN_008867-T1ZINC FINGER PROTEIN
LLU|FUN_008868-T1
LLU|FUN_008869-T1
LLU|FUN_008870-T1SWIM-TYPE DOMAIN-CONTAINING PROTEIN
LLU|FUN_008871-T1
LLU|FUN_008872-T1C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED
LLU|FUN_008873-T1C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED
LLU|FUN_008874-T1CARNITINE O-ACYLTRANSFERASE
LLU|FUN_008875-T1METHIONINE AMINOPEPTIDASE
LLU|FUN_008876-T1SERINE HYDROLASE RBBP9
LLU|FUN_008877-T1RETINOL DEHYDROGENASE
LLU|FUN_008878-T1SEC61 GAMMA SUBUNIT
LLU|FUN_008879-T1
LLU|FUN_008880-T1
LLU|FUN_008881-T1
LLU|FUN_008882-T1MULTICOPPER OXIDASE-RELATED
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