About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_008453-T1
OS493_008454-T1
OS493_008455-T1
OS493_008456-T1
OS493_008457-T1
OS493_008458-T1
OS493_008459-T1
OS493_008460-T1CYTOSOLIC REGULATOR PIANISSIMO
OS493_008462-T1LD33804P
OS493_008463-T1
OS493_008464-T1UNCHARACTERIZED
OS493_008465-T1DELTA ADAPTIN-RELATED
OS493_008466-T1
OS493_008468-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13
OS493_008469-T1CALMODULIN-LYSINE N-METHYLTRANSFERASE
OS493_008470-T1RNA 3' TERMINAL PHOSPHATE CYCLASE
OS493_008471-T1
OS493_008472-T1LD33804P
OS493_008473-T1CYTOSOLIC REGULATOR PIANISSIMO
OS493_008474-T1
OS493_008475-T1
OS493_008476-T1
OS493_008477-T1
OS493_008478-T1THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
OS493_008479-T1
OS493_008480-T1GLUTATHIONE PEROXIDASE
OS493_008481-T1CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
OS493_008482-T141-2 PROTEIN ANTIGEN-RELATED
OS493_008483-T1UNCHARACTERIZED
OS493_008484-T1TRANSMEMBRANE PROTEIN 249
OS493_008486-T1
OS493_008487-T1
OS493_008489-T1
OS493_008490-T1
OS493_008491-T1
OS493_008492-T1
OS493_008493-T1
OS493_008494-T1
OS493_008495-T1
OS493_008496-T1
OS493_008497-T1
OS493_008498-T1
OS493_008499-T1TRANSMEMBRANE PROTEIN 59-LIKE PROTEIN
OS493_008500-T1SOLUTE CARRIER FAMILY 35
OS493_008501-T1THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
OS493_008502-T1THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
OS493_008503-T1THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
OS493_008504-T1
OS493_008505-T1
OS493_008506-T1
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