About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_008191-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_008192-T1MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE
OS493_008193-T1T-BOX PROTEIN-RELATED
OS493_008194-T1T-BOX PROTEIN-RELATED
OS493_008195-T1T-BOX PROTEIN-RELATED
OS493_008196-T1
OS493_008197-T1
OS493_008198-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_008199-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
OS493_008200-T1FI04643P-RELATED
OS493_008201-T1SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
OS493_008202-T1
OS493_008203-T1
OS493_008204-T1
OS493_008208-T1FI04643P-RELATED
OS493_008209-T1
OS493_008210-T1
OS493_008211-T1
OS493_008212-T1SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
OS493_008214-T1FI04643P-RELATED
OS493_008215-T1SERINE/THREONINE-PROTEIN KINASE PLK
OS493_008216-T1G-PROTEIN COUPLED RECEPTOR
OS493_008217-T1
OS493_008218-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_008219-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_008220-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_008221-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_008222-T1
OS493_008223-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_008224-T1G-PROTEIN COUPLED RECEPTOR
OS493_008225-T1G-PROTEIN COUPLED RECEPTOR
OS493_008226-T1NEUROPEPTIDE Y RECEPTOR
OS493_008227-T1UNCHARACTERIZED
OS493_008228-T1MITOCHONDRIAL RIBOSOMAL PROTEIN S31
OS493_008229-T1SERINE/THREONINE-PROTEIN KINASE PLK
OS493_008231-T1WNT RELATED
OS493_008232-T1
OS493_008233-T1
OS493_008234-T1SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE
OS493_008235-T1FIP1-LIKE 1 PROTEIN
OS493_008236-T1SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
OS493_008237-T1CARBON CATABOLITE REPRESSOR PROTEIN 4
OS493_008238-T1NB-ARC AND TPR DOMAIN PROTEIN
OS493_008239-T1NB-ARC AND TPR DOMAIN PROTEIN
OS493_008240-T1NB-ARC AND TPR DOMAIN PROTEIN
OS493_008242-T1PROTEIN INTURNED
OS493_008243-T1
OS493_008244-T1RETINOL DEHYDROGENASE
OS493_008245-T1OLIGOPEPTIDE TRANSPORTER-RELATED
OS493_008246-T1HSDA/SDA1-RELATED
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