About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s012.g0074.t1
Lsat_s012.g0075.t1
Lsat_s012.g0076.t1
Lsat_s012.g0077.t1
Lsat_s012.g0078.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s012.g0079.t1
Lsat_s012.g0080.t1
Lsat_s012.g0081.t1TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
Lsat_s012.g0082.t1DNA2/NAM7 HELICASE FAMILY
Lsat_s012.g0083.t1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Lsat_s012.g0084.t1SYNAPTOPHYSIN
Lsat_s012.g0085.t1
Lsat_s012.g0086.t1
Lsat_s012.g0087.t1
Lsat_s012.g0088.t1
Lsat_s012.g0089.t1
Lsat_s012.g0090.t1
Lsat_s012.g0091.t1
Lsat_s012.g0092.t1RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Lsat_s012.g0093.t1INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Lsat_s012.g0094.t1
Lsat_s012.g0095.t1PROTEIN CBG10425
Lsat_s012.g0096.t1
Lsat_s012.g0097.t1
Lsat_s012.g0098.t1PROTEASOME SUBUNIT ALPHA/BETA
Lsat_s012.g0099.t1NICOTINAMIDE PHOSPHORIBOSYLTRANSFERASE
Lsat_s012.g0100.t1
Lsat_s012.g0101.t1
Lsat_s012.g0102.t1
Lsat_s012.g0103.t1
Lsat_s012.g0104.t1
Lsat_s012.g0105.t1
Lsat_s012.g0106.t1
Lsat_s012.g0107.t1SOLUTE CARRIER FAMILY 25
Lsat_s012.g0108.t1
Lsat_s012.g0109.t1
Lsat_s012.g0110.t1
Lsat_s012.g0111.t1DNA LIGASE
Lsat_s012.g0112.t1
Lsat_s012.g0113.t1NICOTINAMIDE PHOSPHORIBOSYLTRANSFERASE
Lsat_s012.g0114.t1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Lsat_s012.g0115.t1NICOTINAMIDE PHOSPHORIBOSYLTRANSFERASE
Lsat_s012.g0116.t1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Lsat_s012.g0117.t1
Lsat_s012.g0118.t1
Lsat_s012.g0119.t1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Lsat_s012.g0120.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
Lsat_s012.g0121.t1TRANSMEMBRANE PROTEIN
Lsat_s012.g0122.t1
Lsat_s012.g0123.t1GLUCOSE-1-PHOSPHATE THYMIDYLTRANSFERASE
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