About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s011.g0527.t1BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED
Lsat_s011.g0528.t1UNCHARACTERIZED
Lsat_s011.g0529.t1NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE
Lsat_s011.g0530.t1BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED
Lsat_s011.g0531.t1
Lsat_s011.g0532.t1PLAT DOMAIN-CONTAINING PROTEIN
Lsat_s011.g0533.t1
Lsat_s011.g0534.t1
Lsat_s011.g0535.t1
Lsat_s011.g0536.t1
Lsat_s011.g0537.t1
Lsat_s011.g0538.t1ALPHA-L-IDURONIDASE
Lsat_s011.g0539.t1SOLUBLE LIVER ANTIGEN/LIVER PANCREAS ANTIGEN
Lsat_s011.g0540.t1UNCHARACTERIZED
Lsat_s011.g0541.t1VACUOLAR ATP SYNTHASE SUBUNIT AC39
Lsat_s011.g0542.t1ADENOSYLHOMOCYSTEINASE
Lsat_s011.g0543.t1
Lsat_s011.g0544.t1ADENOSYLHOMOCYSTEINASE
Lsat_s011.g0545.t1FATTY ACID HYDROXYLASE
Lsat_s011.g0546.t1RE40534P-RELATED
Lsat_s011.g0547.t1TUBULIN POLYGLUTAMYLASE
Lsat_s011.g0548.t1UPF0183 PROTEIN
Lsat_s011.g0549.t1CADHERIN-23
Lsat_s011.g0550.t1CADHERIN-23
Lsat_s011.g0551.t1PHENYLALANYL-TRNA SYNTHETASE
Lsat_s011.g0552.t1PROTEIN CBG05349
Lsat_s011.g0553.t1
Lsat_s012.g0001.t1
Lsat_s012.g0002.t1TRANSMEMBRANE PROTEIN
Lsat_s012.g0003.t1
Lsat_s012.g0004.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s012.g0005.t1TRANSMEMBRANE PROTEIN
Lsat_s012.g0006.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s012.g0007.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s012.g0008.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s012.g0009.t1ANKYRIN REPEAT FAMILY PROTEIN
Lsat_s012.g0010.t1TAZ PROTEIN TAFAZZIN
Lsat_s012.g0011.t1COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4
Lsat_s012.g0012.t1-
Lsat_s012.g0013.t1NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
Lsat_s012.g0014.t1CELL DIVISION PROTEIN KINASE
Lsat_s012.g0015.t1GLYCOSYLTRANSFERASE
Lsat_s012.g0016.t1CELL DIVISION PROTEIN KINASE
Lsat_s012.g0017.t1B-CELL TRANSLOCATION GENE
Lsat_s012.g0018.t1
Lsat_s012.g0019.t1SPORE COAT PROTEIN SP85
Lsat_s012.g0020.t1
Lsat_s012.g0021.t1INOSITOL POLYPHOSPHATE KINASE 1
Lsat_s012.g0022.t1
Lsat_s012.g0023.t1
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