About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s011.g0227.t1METHYLTRANSFERASE LIKE 7B
Lsat_s011.g0228.t1CALCIUM BINDING PROTEIN
Lsat_s011.g0229.t1BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA
Lsat_s011.g0230.t1EF HAND DOMAIN FAMILY A1,A2-RELATED
Lsat_s011.g0231.t1UNCHARACTERIZED
Lsat_s011.g0232.t1
Lsat_s011.g0233.t1
Lsat_s011.g0234.t1
Lsat_s011.g0235.t1
Lsat_s011.g0236.t1
Lsat_s011.g0237.t1FIBROBLAST GROWTH FACTOR
Lsat_s011.g0238.t1GROUNDHOG-RELATED
Lsat_s011.g0239.t1
Lsat_s011.g0240.t1
Lsat_s011.g0241.t1RCG42593, ISOFORM CRA_A
Lsat_s011.g0242.t1
Lsat_s011.g0243.t1KINASE D-INTERACTING SUBSTRATE OF 220 KDA
Lsat_s011.g0244.t1
Lsat_s011.g0245.t1
Lsat_s011.g0246.t1TRANSLATION INITIATION FACTOR IF-2-RELATED
Lsat_s011.g0247.t1
Lsat_s011.g0248.t1
Lsat_s011.g0249.t1
Lsat_s011.g0250.t1
Lsat_s011.g0251.t1
Lsat_s011.g0252.t1SPROUTY
Lsat_s011.g0253.t1
Lsat_s011.g0254.t1
Lsat_s011.g0255.t1
Lsat_s011.g0256.t1
Lsat_s011.g0257.t1
Lsat_s011.g0258.t1
Lsat_s011.g0259.t1
Lsat_s011.g0260.t1
Lsat_s011.g0261.t1
Lsat_s011.g0262.t1
Lsat_s011.g0263.t1
Lsat_s011.g0264.t1NEDD4 FAMILY INTERACTING PROTEIN 1/2
Lsat_s011.g0265.t1AGAP001705-PA
Lsat_s011.g0266.t1
Lsat_s011.g0267.t1
Lsat_s011.g0268.t1FIP1-LIKE 1 PROTEIN
Lsat_s011.g0269.t1TRANSLATION INITIATION FACTOR IF-3
Lsat_s011.g0270.t1PIRNA BIOGENESIS PROTEIN EXD1
Lsat_s011.g0271.t1MUCIN 4B, ISOFORM B-RELATED
Lsat_s011.g0272.t1TRANSMEMBRANE PROTEASE SERINE
Lsat_s011.g0273.t1
Lsat_s011.g0274.t1PIRNA BIOGENESIS PROTEIN EXD1
Lsat_s011.g0275.t1CHYMOTRYPSIN-RELATED
Lsat_s011.g0276.t1
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