About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s011.g0077.t1CADHERIN-87A
Lsat_s011.g0078.t1
Lsat_s011.g0079.t1CADHERIN-87A
Lsat_s011.g0080.t1
Lsat_s011.g0081.t1
Lsat_s011.g0082.t1
Lsat_s011.g0083.t1GM2 GANGLIOSIDE ACTIVATOR PROTEIN
Lsat_s011.g0084.t1ODD-SKIPPED - RELATED
Lsat_s011.g0085.t1
Lsat_s011.g0086.t1
Lsat_s011.g0087.t1
Lsat_s011.g0088.t1
Lsat_s011.g0089.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s011.g0090.t1CELL DIVISION PROTEIN KINASE
Lsat_s011.g0091.t1
Lsat_s011.g0092.t1
Lsat_s011.g0093.t1
Lsat_s011.g0094.t1
Lsat_s011.g0095.t1
Lsat_s011.g0096.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s011.g0097.t1OVOCHYMASE-RELATED
Lsat_s011.g0098.t1
Lsat_s011.g0099.t1
Lsat_s011.g0100.t1
Lsat_s011.g0101.t1TRICHOHYALIN-RELATED
Lsat_s011.g0102.t1
Lsat_s011.g0103.t1
Lsat_s011.g0104.t1
Lsat_s011.g0105.t1
Lsat_s011.g0106.t1
Lsat_s011.g0107.t1
Lsat_s011.g0108.t1
Lsat_s011.g0109.t1
Lsat_s011.g0110.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s011.g0111.t1
Lsat_s011.g0112.t1
Lsat_s011.g0113.t1
Lsat_s011.g0114.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s011.g0115.t1
Lsat_s011.g0116.t1
Lsat_s011.g0117.t1
Lsat_s011.g0118.t1PROTON CHANNEL OTOP
Lsat_s011.g0119.t1
Lsat_s011.g0120.t1SH3 DOMAIN-CONTAINING
Lsat_s011.g0121.t1
Lsat_s011.g0122.t1PERIOSTIN-RELATED
Lsat_s011.g0123.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s011.g0124.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s011.g0125.t1
Lsat_s011.g0126.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
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