About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s010.g0382.t1E3 UBIQUITIN-PROTEIN LIGASE RNF180
Lsat_s010.g0383.t1PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
Lsat_s010.g0384.t1UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT
Lsat_s010.g0385.t1
Lsat_s010.g0386.t1
Lsat_s010.g0387.t1
Lsat_s010.g0388.t1WD40 REPEAT PROTEINPRL1/PRL2-RELATED
Lsat_s010.g0389.t1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Lsat_s010.g0390.t1UPF0547 PROTEIN C16ORF87
Lsat_s010.g0391.t1HSC70CB, ISOFORM G-RELATED
Lsat_s010.g0392.t1SACSIN
Lsat_s010.g0393.t1SERINE/THREONINE-PROTEIN KINASE PLK
Lsat_s010.g0394.t1SERINE/THREONINE-PROTEIN KINASE PLK
Lsat_s010.g0395.t1SACSIN
Lsat_s010.g0396.t1SACSIN
Lsat_s010.g0397.t1PDZ DOMAIN-CONTAINING PROTEIN 8
Lsat_s010.g0398.t1SACSIN
Lsat_s010.g0399.t1CENTROSOMAL PROTEIN OF 44 KDA
Lsat_s010.g0400.t1
Lsat_s010.g0401.t1POLYCOMB GROUP PROTEIN
Lsat_s010.g0402.t1WW DOMAIN BINDING PROTEIN 4
Lsat_s010.g0403.t1
Lsat_s010.g0404.t1
Lsat_s010.g0405.t1SULFURTRANSFERASE-RELATED
Lsat_s010.g0406.t1
Lsat_s010.g0407.t1HISTIDYL-TRNA SYNTHETASE
Lsat_s010.g0408.t1SEC3/SYNTAXIN-RELATED
Lsat_s010.g0409.t1
Lsat_s010.g0410.t1
Lsat_s010.g0411.t1
Lsat_s010.g0412.t1
Lsat_s010.g0413.t1
Lsat_s010.g0414.t1
Lsat_s010.g0415.t1
Lsat_s010.g0416.t1
Lsat_s010.g0417.t1TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED
Lsat_s010.g0418.t1UNCHARACTERIZED
Lsat_s010.g0419.t1
Lsat_s010.g0420.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s010.g0421.t1COLLAGEN ALPHA
Lsat_s010.g0422.t1
Lsat_s010.g0423.t1
Lsat_s010.g0424.t1INTELECTIN
Lsat_s010.g0425.t1SI:CH211-266K2.1
Lsat_s010.g0426.t1TRANSIENT RECEPTOR POTENTIAL CHANNEL
Lsat_s010.g0427.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s010.g0428.t1
Lsat_s010.g0429.t1
Lsat_s010.g0430.t1TRYPSIN-RELATED
Lsat_s010.g0431.t1PHOSPHORYLASE B KINASE REGULATORY SUBUNIT
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