About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s010.g0182.t1
Lsat_s010.g0183.t1UNCHARACTERIZED
Lsat_s010.g0184.t1
Lsat_s010.g0185.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s010.g0186.t1
Lsat_s010.g0187.t1
Lsat_s010.g0188.t1
Lsat_s010.g0189.t1POU DOMAIN
Lsat_s010.g0190.t1
Lsat_s010.g0191.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s010.g0192.t1
Lsat_s010.g0193.t1
Lsat_s010.g0194.t1CALRETICULIN AND CALNEXIN
Lsat_s010.g0195.t1
Lsat_s010.g0196.t1
Lsat_s010.g0197.t1SUPEROXIDE DISMUTASE CU-ZN -RELATED
Lsat_s010.g0198.t1ZCCHC10 PROTEIN
Lsat_s010.g0199.t1CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
Lsat_s010.g0200.t1-
Lsat_s010.g0201.t1PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
Lsat_s010.g0202.t1
Lsat_s010.g0203.t1SOX TRANSCRIPTION FACTOR
Lsat_s010.g0204.t1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
Lsat_s010.g0205.t1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
Lsat_s010.g0206.t1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
Lsat_s010.g0207.t1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
Lsat_s010.g0208.t1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
Lsat_s010.g0209.t1
Lsat_s010.g0210.t1RHO-GTPASE-ACTIVATING PROTEIN 6 FAMILY MEMBER
Lsat_s010.g0211.t1
Lsat_s010.g0212.t1
Lsat_s010.g0213.t1
Lsat_s010.g0214.t1
Lsat_s010.g0215.t1TESTIS-EXPRESSED PROTEIN 26 ISOFORM X3
Lsat_s010.g0216.t1CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR
Lsat_s010.g0217.t1MUCIN 4-RELATED
Lsat_s010.g0218.t1MUCIN 4-RELATED
Lsat_s010.g0219.t1AMINOTRANSFERASE
Lsat_s010.g0220.t1MUCIN 4-RELATED
Lsat_s010.g0221.t1MUCIN 4-RELATED
Lsat_s010.g0222.t1
Lsat_s010.g0223.t1MUCIN 4-RELATED
Lsat_s010.g0224.t1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Lsat_s010.g0225.t1ATAXIN-7-LIKE PROTEIN 3
Lsat_s010.g0226.t1CONTACTIN 5
Lsat_s010.g0227.t1SEPIAPTERIN REDUCTASE
Lsat_s010.g0228.t1MULTIPLE PDZ DOMAIN PROTEIN
Lsat_s010.g0229.t1PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED
Lsat_s010.g0230.t1PHOSPHATIDYLCHOLINE TRANSFER PROTEIN
Lsat_s010.g0231.t1PHOSPHOMANNOMUTASE 45A
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