About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s010.g0032.t1
Lsat_s010.g0033.t1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Lsat_s010.g0034.t1REPETIN
Lsat_s010.g0035.t1
Lsat_s010.g0036.t1SPORE COAT PROTEIN SP85
Lsat_s010.g0037.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s010.g0038.t1
Lsat_s010.g0039.t1UDP-GLUCOSE 4-EPIMERASE
Lsat_s010.g0040.t1MYELIN PROTEOLIPID
Lsat_s010.g0041.t1
Lsat_s010.g0042.t1
Lsat_s010.g0043.t1HEAVY PROTEIN, PUTATIVE-RELATED
Lsat_s010.g0044.t1
Lsat_s010.g0045.t1
Lsat_s010.g0046.t1
Lsat_s010.g0047.t1
Lsat_s010.g0048.t1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
Lsat_s010.g0049.t1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
Lsat_s010.g0050.t1AGAP000124-PA
Lsat_s010.g0051.t1
Lsat_s010.g0052.t1
Lsat_s010.g0053.t1
Lsat_s010.g0054.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s010.g0055.t1
Lsat_s010.g0056.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s010.g0057.t1
Lsat_s010.g0058.t1
Lsat_s010.g0059.t1
Lsat_s010.g0060.t1
Lsat_s010.g0061.t1
Lsat_s010.g0062.t1UNCHARACTERIZED
Lsat_s010.g0063.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s010.g0064.t1PROTEIN ZERKNUELLT 1-RELATED
Lsat_s010.g0065.t1PROTEIN ZERKNUELLT 1-RELATED
Lsat_s010.g0066.t1ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE
Lsat_s010.g0067.t1
Lsat_s010.g0068.t1PROTEIN ARGININE N-METHYLTRANSFERASE
Lsat_s010.g0069.t1BTB/POZ DOMAIN-CONTAINING
Lsat_s010.g0070.t1CADHERIN-23
Lsat_s010.g0071.t1CADHERIN-87A
Lsat_s010.g0072.t1
Lsat_s010.g0073.t1DNA HELICASE RECQ FAMILY MEMBER
Lsat_s010.g0074.t1PROTEIN CBG26694
Lsat_s010.g0075.t1
Lsat_s010.g0076.t1DESMOGLEIN FAMILY MEMBER
Lsat_s010.g0077.t1CADHERIN-87A
Lsat_s010.g0078.t1
Lsat_s010.g0079.t1
Lsat_s010.g0080.t1
Lsat_s010.g0081.t1DESMOGLEIN FAMILY MEMBER
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