About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s009.g0500.t1
Lsat_s009.g0501.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s009.g0502.t1
Lsat_s009.g0503.t1
Lsat_s009.g0504.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s009.g0505.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s009.g0506.t1
Lsat_s009.g0507.t1
Lsat_s009.g0508.t1
Lsat_s009.g0509.t1
Lsat_s009.g0510.t1
Lsat_s009.g0511.t1
Lsat_s009.g0512.t1CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
Lsat_s009.g0513.t1
Lsat_s009.g0514.t1
Lsat_s009.g0515.t1
Lsat_s009.g0516.t1
Lsat_s009.g0517.t1
Lsat_s009.g0518.t1
Lsat_s009.g0519.t1
Lsat_s009.g0520.t1
Lsat_s009.g0521.t1
Lsat_s009.g0522.t1TNF RECEPTOR ASSOCIATED FACTOR
Lsat_s009.g0523.t1
Lsat_s009.g0524.t1PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
Lsat_s009.g0525.t1
Lsat_s009.g0526.t1
Lsat_s009.g0527.t1
Lsat_s009.g0528.t1RFX TRANSCRIPTION FACTOR FAMILY
Lsat_s009.g0529.t1
Lsat_s009.g0530.t1CYTOCHROME P450 508A4-RELATED
Lsat_s009.g0531.t1
Lsat_s009.g0532.t1
Lsat_s009.g0533.t1BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED
Lsat_s009.g0534.t1HISTONE-LYSINE N-METHYLTRANSFERASE EGGLESS
Lsat_s009.g0535.t1PROTEIN FOLDING REGULATOR
Lsat_s009.g0536.t1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 72
Lsat_s009.g0537.t1TRANSCRIPTIONAL ADAPTER 3-RELATED
Lsat_s009.g0538.t1
Lsat_s009.g0539.t1ABC TRANSPORTER G FAMILY MEMBER 28
Lsat_s009.g0540.t1AATF PROTEIN APOPTOSIS ANTAGONIZING TRANSCRIPTION FACTOR
Lsat_s009.g0541.t1
Lsat_s009.g0542.t1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Lsat_s009.g0543.t1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Lsat_s009.g0544.t1
Lsat_s009.g0545.t1OPSIN
Lsat_s009.g0546.t1
Lsat_s009.g0547.t1SHORT-CHAIN DEHYDROGENASE/REDUCTASE
Lsat_s009.g0548.t160S RIBOSOMAL PROTEIN L12
Lsat_s009.g0549.t1UDP- GLUCOSE PYROPHOSPHORYLASE
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