Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s010.g0232.t1 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
| Lsat_s010.g0233.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
| Lsat_s010.g0234.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
| Lsat_s010.g0235.t1 | |
| Lsat_s010.g0236.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
| Lsat_s010.g0237.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
| Lsat_s010.g0238.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
| Lsat_s010.g0239.t1 | NEUROTRANSMITTER GATED ION CHANNEL |
| Lsat_s010.g0240.t1 | LIN-24 (TWENTY-FOUR) LIKE |
| Lsat_s010.g0241.t1 | LIN-24 (TWENTY-FOUR) LIKE |
| Lsat_s010.g0242.t1 | LIN-24 (TWENTY-FOUR) LIKE |
| Lsat_s010.g0243.t1 | LIN-24 (TWENTY-FOUR) LIKE |
| Lsat_s010.g0244.t1 | LIN-24 (TWENTY-FOUR) LIKE |
| Lsat_s010.g0245.t1 | |
| Lsat_s010.g0246.t1 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT |
| Lsat_s010.g0247.t1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 |
| Lsat_s010.g0248.t1 | |
| Lsat_s010.g0249.t1 | |
| Lsat_s010.g0250.t1 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| Lsat_s010.g0251.t1 | |
| Lsat_s010.g0252.t1 | GOLGI MEMBRANE PROTEIN YIP1 |
| Lsat_s010.g0253.t1 | GOLGI MEMBRANE PROTEIN YIP1 |
| Lsat_s010.g0254.t1 | UNCHARACTERIZED |
| Lsat_s010.g0255.t1 | |
| Lsat_s010.g0256.t1 | |
| Lsat_s010.g0257.t1 | |
| Lsat_s010.g0258.t1 | PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE |
| Lsat_s010.g0259.t1 | PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN |
| Lsat_s010.g0260.t1 | |
| Lsat_s010.g0261.t1 | THYROTROPH EMBRYONIC FACTOR RELATED |
| Lsat_s010.g0262.t1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED |
| Lsat_s010.g0263.t1 | ASPARTYL/LYSYL-TRNA SYNTHETASE |
| Lsat_s010.g0264.t1 | RAGULATOR COMPLEX PROTEIN LAMTOR1 |
| Lsat_s010.g0265.t1 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51 |
| Lsat_s010.g0266.t1 | CENTROSOMAL PROTEIN 2 |
| Lsat_s010.g0267.t1 | RNF121 PROTEIN |
| Lsat_s010.g0268.t1 | |
| Lsat_s010.g0269.t1 | |
| Lsat_s010.g0270.t1 | PROTEIN CBG12054-RELATED |
| Lsat_s010.g0271.t1 | POLY ADP-RIBOSE GLYCOHYDROLASE |
| Lsat_s010.g0272.t1 | |
| Lsat_s010.g0273.t1 | |
| Lsat_s010.g0274.t1 | ENZYMATIC POLYPROTEIN-RELATED |
| Lsat_s010.g0275.t1 | |
| Lsat_s010.g0276.t1 | |
| Lsat_s010.g0277.t1 | |
| Lsat_s010.g0278.t1 | PROTEIN CBG12054-RELATED |
| Lsat_s010.g0279.t1 | |
| Lsat_s010.g0280.t1 | |
| Lsat_s010.g0281.t1 | - |
