About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s010.g0332.t1
Lsat_s010.g0333.t1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Lsat_s010.g0334.t1
Lsat_s010.g0335.t1
Lsat_s010.g0336.t1
Lsat_s010.g0337.t1
Lsat_s010.g0338.t1
Lsat_s010.g0339.t1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
Lsat_s010.g0340.t1
Lsat_s010.g0341.t1
Lsat_s010.g0342.t1SPARTIN
Lsat_s010.g0343.t1
Lsat_s010.g0344.t1GRB2-ASSOCIATED-BINDING PROTEIN
Lsat_s010.g0345.t1CALPAIN
Lsat_s010.g0346.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s010.g0347.t1
Lsat_s010.g0348.t1COLLAGEN ALPHA
Lsat_s010.g0349.t1RHO-TYPE GTPASE ACTIVATING PROTEIN
Lsat_s010.g0350.t1CADHERIN-87A
Lsat_s010.g0351.t1
Lsat_s010.g0352.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s010.g0353.t1
Lsat_s010.g0354.t1SODIUM-BILE ACID COTRANSPORTER
Lsat_s010.g0355.t1
Lsat_s010.g0356.t1GM2 GANGLIOSIDE ACTIVATOR PROTEIN
Lsat_s010.g0357.t1
Lsat_s010.g0358.t1
Lsat_s010.g0359.t1OXIDASE/PEROXIDASE
Lsat_s010.g0360.t1METHYLMALONYL-COA MUTASE
Lsat_s010.g0361.t1HISTONE PARYLATION FACTOR 1
Lsat_s010.g0362.t1
Lsat_s010.g0363.t1TRANSIENT RECEPTOR POTENTIAL CHANNEL
Lsat_s010.g0364.t1
Lsat_s010.g0365.t1TRANSIENT RECEPTOR POTENTIAL CHANNEL
Lsat_s010.g0366.t1NEUROCHONDRIN
Lsat_s010.g0367.t1
Lsat_s010.g0368.t1
Lsat_s010.g0369.t1OXIDOREDUCTASE GLYR1-RELATED
Lsat_s010.g0370.t1ANTIGEN BSP, PUTATIVE-RELATED
Lsat_s010.g0371.t1HEPATOMA-DERIVED GROWTH FACTOR-RELATED
Lsat_s010.g0372.t1TRANSCRIPTIONAL REGULATOR
Lsat_s010.g0373.t1CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS
Lsat_s010.g0374.t1
Lsat_s010.g0375.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s010.g0376.t1
Lsat_s010.g0377.t1
Lsat_s010.g0378.t1
Lsat_s010.g0379.t1LP04239P
Lsat_s010.g0380.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s010.g0381.t1CARBONIC ANHYDRASE
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