About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s010.g0432.t1
Lsat_s010.g0433.t1COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER
Lsat_s010.g0434.t1SPHINGOSINE KINASE
Lsat_s010.g0435.t1
Lsat_s010.g0436.t1
Lsat_s010.g0437.t1UBIQUITIN-PROTEIN LIGASE E3C
Lsat_s010.g0438.t1NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
Lsat_s010.g0439.t1CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Lsat_s010.g0440.t1
Lsat_s010.g0441.t1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Lsat_s010.g0442.t1INVERTED FORMIN-2
Lsat_s010.g0443.t1
Lsat_s010.g0444.t1
Lsat_s010.g0445.t1
Lsat_s010.g0446.t1
Lsat_s010.g0447.t1
Lsat_s010.g0448.t1
Lsat_s010.g0449.t1
Lsat_s010.g0450.t1BONUS, ISOFORM C-RELATED
Lsat_s010.g0451.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s010.g0452.t1ZGC:158260
Lsat_s010.g0453.t1
Lsat_s010.g0454.t1
Lsat_s010.g0455.t1
Lsat_s010.g0456.t1GLUCOSAMINE-6-PHOSPHATE ISOMERASE
Lsat_s010.g0457.t1GLUCOSAMINE-6-PHOSPHATE ISOMERASE
Lsat_s010.g0458.t1UNCHARACTERIZED
Lsat_s010.g0459.t1THO2 PROTEIN
Lsat_s010.g0460.t15-HYDROXYTRYPTAMINE RECEPTOR
Lsat_s010.g0461.t1THO2 PROTEIN
Lsat_s010.g0462.t1COPPER TRANSPORT PROTEIN ATOX1
Lsat_s010.g0463.t1HOMEOBOX PROTEIN ARISTALESS
Lsat_s010.g0464.t1
Lsat_s010.g0465.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 169
Lsat_s010.g0466.t1NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B14.5B
Lsat_s010.g0467.t1PAXIP1-ASSOCIATED GLUTAMATE-RICH PROTEIN 1
Lsat_s010.g0468.t1CRAMPED PROTEIN
Lsat_s010.g0469.t1HISTIDINE-RICH GLYCOPROTEIN
Lsat_s010.g0470.t1
Lsat_s010.g0471.t1ACROSIN-RELATED
Lsat_s010.g0472.t1CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER
Lsat_s010.g0473.t1
Lsat_s010.g0474.t1
Lsat_s010.g0475.t1
Lsat_s010.g0476.t1
Lsat_s010.g0477.t1
Lsat_s010.g0478.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s010.g0479.t1
Lsat_s010.g0480.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s010.g0481.t1ACROSIN-RELATED
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