About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s010.g0482.t1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Lsat_s010.g0483.t1
Lsat_s010.g0484.t1SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED
Lsat_s010.g0485.t1PROTEIN DIAPHANOUS
Lsat_s010.g0486.t1
Lsat_s010.g0487.t1SACSIN
Lsat_s010.g0488.t1SACSIN
Lsat_s010.g0489.t1ACYL-COA SYNTHETASE
Lsat_s010.g0490.t1ACYL-COA SYNTHETASE
Lsat_s010.g0491.t1SACSIN
Lsat_s010.g0492.t1DAP3-BINDING CELL DEATH ENHANCER 1
Lsat_s010.g0493.t1REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
Lsat_s010.g0494.t1UNCHARACTERIZED
Lsat_s010.g0495.t1IQ DOMAIN-CONTAINING PROTEIN M
Lsat_s010.g0496.t1IQ DOMAIN-CONTAINING PROTEIN M
Lsat_s010.g0497.t1RING FINGER PROTEIN 127
Lsat_s010.g0498.t1
Lsat_s010.g0499.t1
Lsat_s010.g0500.t1
Lsat_s010.g0501.t1
Lsat_s010.g0502.t1
Lsat_s010.g0503.t1RING FINGER PROTEIN 127
Lsat_s010.g0504.t1COMM DOMAIN CONTAINING PROTEIN 5
Lsat_s010.g0505.t1
Lsat_s011.g0001.t1PROTEIN CBG26694
Lsat_s011.g0002.t1HISTONE H1
Lsat_s011.g0003.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s011.g0004.t1
Lsat_s011.g0005.t1ANKYRIN REPEAT CONTAINING
Lsat_s011.g0006.t1TRANSCRIPTION INITIATION FACTOR TFIID
Lsat_s011.g0007.t1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Lsat_s011.g0008.t1
Lsat_s011.g0009.t1CADHERIN-87A
Lsat_s011.g0010.t1PIEZO-TYPE MECHANOSENSITIVE ION CHANNEL HOMOLOG
Lsat_s011.g0011.t1EPHRIN TYPE-B RECEPTOR
Lsat_s011.g0012.t1DESMOGLEIN FAMILY MEMBER
Lsat_s011.g0013.t1ATP-DEPENDENT (S)-NAD(P)H-HYDRATE DEHYDRATASE FAMILY MEMBER
Lsat_s011.g0014.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 138
Lsat_s011.g0015.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s011.g0016.t1OVARIAN CARCINOMA IMMUNOREACTIVE ANTIGEN
Lsat_s011.g0017.t1
Lsat_s011.g0018.t1EPHRIN TYPE-B RECEPTOR
Lsat_s011.g0019.t1ALPHA-AMYLASE FAMILY MEMBER
Lsat_s011.g0020.t1MYELIN PROTEOLIPID
Lsat_s011.g0021.t1
Lsat_s011.g0022.t12-HYDROXYACID DEHYDROGENASE-RELATED
Lsat_s011.g0023.t12-HYDROXYACID DEHYDROGENASE-RELATED
Lsat_s011.g0024.t1AT01821P-RELATED
Lsat_s011.g0025.t1APOPTOSIS-INDUCING FACTOR 1
Lsat_s011.g0026.t1AMPHOTERIN-INDUCED PROTEIN
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