About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s011.g0327.t1RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
Lsat_s011.g0328.t1PORCUPINE
Lsat_s011.g0329.t1
Lsat_s011.g0330.t1C2 DOMAIN-CONTAINING PROTEIN
Lsat_s011.g0331.t1TOL-PAL SYSTEM PROTEIN TOLA
Lsat_s011.g0332.t1
Lsat_s011.g0333.t1
Lsat_s011.g0334.t1PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Lsat_s011.g0335.t1LIPOPOLYSACCHARIDE CHOLINEPHOSPHOTRANSFERASE LICD
Lsat_s011.g0336.t1
Lsat_s011.g0337.t1TRICHOHYALIN-RELATED
Lsat_s011.g0338.t1
Lsat_s011.g0339.t1
Lsat_s011.g0340.t1PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN
Lsat_s011.g0341.t1PROTEASOME ASSEMBLY CHAPERONE 4
Lsat_s011.g0342.t1TUBULIN
Lsat_s011.g0343.t1TUBULIN
Lsat_s011.g0344.t1
Lsat_s011.g0345.t1TUBULIN
Lsat_s011.g0346.t1
Lsat_s011.g0347.t1CHARGED MULTIVESICULAR BODY PROTEIN
Lsat_s011.g0348.t1KATANIN P80 SUBUNIT
Lsat_s011.g0349.t1CORE-BINDING FACTOR, BETA SUBUNIT
Lsat_s011.g0350.t1UPF0183 PROTEIN
Lsat_s011.g0351.t1CHONDROLECTIN VARIANT CHODLFDELTAE.
Lsat_s011.g0352.t1
Lsat_s011.g0353.t1
Lsat_s011.g0354.t1PA14 DOMAIN-CONTAINING PROTEIN
Lsat_s011.g0355.t1
Lsat_s011.g0356.t1
Lsat_s011.g0357.t1ADENOSINE/GUANOSINE DIPHOSPHATASE
Lsat_s011.g0358.t1ADENOSINE/GUANOSINE DIPHOSPHATASE
Lsat_s011.g0359.t1
Lsat_s011.g0360.t1ADENOSINE/GUANOSINE DIPHOSPHATASE
Lsat_s011.g0361.t1
Lsat_s011.g0362.t1N-ACETYLTRANSFERASE
Lsat_s011.g0363.t1-
Lsat_s011.g0364.t1MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN
Lsat_s011.g0365.t1
Lsat_s011.g0366.t1
Lsat_s011.g0367.t1
Lsat_s011.g0368.t1
Lsat_s011.g0369.t1
Lsat_s011.g0370.t1UBIQUITIN-CONJUGATING ENZYME E2
Lsat_s011.g0371.t1
Lsat_s011.g0372.t1
Lsat_s011.g0373.t1AMINO ACID TRANSPORTER
Lsat_s011.g0374.t1
Lsat_s011.g0375.t13-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE
Lsat_s011.g0376.t1WD REPEAT-CONTAINING PROTEIN 97
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