About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s011.g0427.t1
Lsat_s011.g0428.t1DYNACTIN SUBUNIT 5
Lsat_s011.g0429.t1
Lsat_s011.g0430.t1
Lsat_s011.g0431.t1
Lsat_s011.g0432.t1
Lsat_s011.g0433.t1CHRONIC MYELOGENOUS LEUKEMIA TUMOR ANTIGEN 66
Lsat_s011.g0434.t139S RIBOSOMAL PROTEIN L52, MITOCHONDRIAL
Lsat_s011.g0435.t1SI:CH211-108C17.2-RELATED-RELATED
Lsat_s011.g0436.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s011.g0437.t1DNA LIGASE
Lsat_s011.g0438.t1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Lsat_s011.g0439.t1
Lsat_s011.g0440.t1THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1
Lsat_s011.g0441.t1NG5
Lsat_s011.g0442.t1NG5
Lsat_s011.g0443.t1DISCS LARGE
Lsat_s011.g0444.t1NG5
Lsat_s011.g0445.t1
Lsat_s011.g0446.t1PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
Lsat_s011.g0447.t1
Lsat_s011.g0448.t1-
Lsat_s011.g0449.t1-
Lsat_s011.g0450.t1HYALURONIDASE
Lsat_s011.g0451.t1
Lsat_s011.g0452.t1
Lsat_s011.g0453.t1COLLAGEN ALPHA
Lsat_s011.g0454.t1COLLAGEN ALPHA
Lsat_s011.g0455.t1SH3-BINDING
Lsat_s011.g0456.t1
Lsat_s011.g0457.t1CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA
Lsat_s011.g0458.t140S RIBOSOMAL PROTEIN S3A
Lsat_s011.g0459.t12-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2
Lsat_s011.g0460.t1X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1
Lsat_s011.g0461.t1NF-KAPPA B ACTIVATING PROTEIN
Lsat_s011.g0462.t1-
Lsat_s011.g0463.t1WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER
Lsat_s011.g0464.t1SMALL NUCLEAR RIBONUCLEOPROTEIN SM
Lsat_s011.g0465.t1UNCHARACTERIZED
Lsat_s011.g0466.t1CASEIN KINASE II SUBUNIT ALPHA
Lsat_s011.g0467.t1ORF PROTEIN
Lsat_s011.g0468.t1
Lsat_s011.g0469.t1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Lsat_s011.g0470.t1RHOPHILIN
Lsat_s011.g0471.t1PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER
Lsat_s011.g0472.t1MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S22
Lsat_s011.g0473.t1MYOSIN LIGHT CHAIN 1, 3
Lsat_s011.g0474.t1OTU DOMAIN CONTAINING PROTEIN
Lsat_s011.g0475.t1TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4
Lsat_s011.g0476.t1STAR-RELATED LIPID TRANSFER PROTEIN 9
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