About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s012.g0124.t1
Lsat_s012.g0125.t1
Lsat_s012.g0126.t1
Lsat_s012.g0127.t1
Lsat_s012.g0128.t1BONE MARROW PROTEOGLYCAN
Lsat_s012.g0129.t1
Lsat_s012.g0130.t1
Lsat_s012.g0131.t1
Lsat_s012.g0132.t1
Lsat_s012.g0133.t1
Lsat_s012.g0134.t1
Lsat_s012.g0135.t15-HYDROXYTRYPTAMINE RECEPTOR
Lsat_s012.g0136.t1INTERLEUKIN-17 RECEPTOR
Lsat_s012.g0137.t1COLLAGEN
Lsat_s012.g0138.t1
Lsat_s012.g0139.t1
Lsat_s012.g0140.t1TRICHOHYALIN-RELATED
Lsat_s012.g0141.t1UBIQUITIN-ACTIVATING ENZYME E1
Lsat_s012.g0142.t1
Lsat_s012.g0143.t1
Lsat_s012.g0144.t1
Lsat_s012.g0145.t1CATION TRANSPORTING ATPASE
Lsat_s012.g0146.t1
Lsat_s012.g0147.t1
Lsat_s012.g0148.t1
Lsat_s012.g0149.t1
Lsat_s012.g0150.t1PLACENTAL PROTEIN 6
Lsat_s012.g0151.t1
Lsat_s012.g0152.t1ATP-DEPENDENT RNA HELICASE DBP3
Lsat_s012.g0153.t1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54
Lsat_s012.g0154.t1
Lsat_s012.g0155.t1
Lsat_s012.g0156.t1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54
Lsat_s012.g0157.t1
Lsat_s012.g0158.t1
Lsat_s012.g0159.t1URINARY PROTEIN RUP /ACROSOMAL PROTEIN SP-10
Lsat_s012.g0160.t1
Lsat_s012.g0161.t1
Lsat_s012.g0162.t1
Lsat_s012.g0163.t1
Lsat_s012.g0164.t1ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 3
Lsat_s012.g0165.t1
Lsat_s012.g0166.t1EXS-RELATED PROTEIN
Lsat_s012.g0167.t1
Lsat_s012.g0168.t1ALDEHYDE DEHYDROGENASE-RELATED
Lsat_s012.g0169.t1
Lsat_s012.g0170.t1SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
Lsat_s012.g0171.t1
Lsat_s012.g0172.t1SYNAPSIN
Lsat_s012.g0173.t1
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