About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s012.g0224.t1
Lsat_s012.g0225.t1TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBER
Lsat_s012.g0226.t1
Lsat_s012.g0227.t1TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBER
Lsat_s012.g0228.t1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR
Lsat_s012.g0229.t1TRANSPOSON
Lsat_s012.g0230.t1
Lsat_s012.g0231.t1UNCHARACTERIZED
Lsat_s012.g0232.t1EXOCYST COMPLEX COMPONENT 8
Lsat_s012.g0233.t1
Lsat_s012.g0234.t1DNAJ HOMOLOG SUBFAMILY C MEMBER 11
Lsat_s012.g0235.t1
Lsat_s012.g0236.t1
Lsat_s012.g0237.t1
Lsat_s012.g0238.t1
Lsat_s012.g0239.t1
Lsat_s012.g0240.t1
Lsat_s012.g0241.t1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 60
Lsat_s012.g0242.t1BETA-HEXOSAMINIDASE
Lsat_s012.g0243.t1
Lsat_s012.g0244.t1
Lsat_s012.g0245.t1
Lsat_s012.g0246.t1
Lsat_s012.g0247.t1
Lsat_s012.g0248.t1
Lsat_s012.g0249.t1
Lsat_s012.g0250.t1
Lsat_s012.g0251.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s012.g0252.t1
Lsat_s012.g0253.t1
Lsat_s012.g0254.t1CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2
Lsat_s012.g0255.t1
Lsat_s012.g0256.t1ATAXIN 1
Lsat_s012.g0257.t1
Lsat_s012.g0258.t1
Lsat_s012.g0259.t1
Lsat_s012.g0260.t1TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT
Lsat_s012.g0261.t1GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Lsat_s012.g0262.t1D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
Lsat_s012.g0263.t1CHLORIDE CHANNEL PROTEIN 2
Lsat_s012.g0264.t1CHLORIDE CHANNEL PROTEIN 2
Lsat_s012.g0265.t1
Lsat_s012.g0266.t1
Lsat_s012.g0267.t1PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7
Lsat_s012.g0268.t1UNCHARACTERIZED
Lsat_s012.g0269.t1
Lsat_s012.g0270.t1UNCHARACTERIZED
Lsat_s012.g0271.t1
Lsat_s012.g0272.t1SRCR DOMAIN-CONTAINING PROTEIN
Lsat_s012.g0273.t1
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