About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_24001-0.3
Bpl_scaf_24001-0.8CEREBELLIN-RELATED
Bpl_scaf_2401-0.1INNEXIN
Bpl_scaf_2401-0.4-
Bpl_scaf_2401-1.0
Bpl_scaf_2401-1.1LD33804P
Bpl_scaf_2401-1.2LD33804P
Bpl_scaf_2401-1.5NANOS PROTEIN
Bpl_scaf_2401-2.2CEREBELLIN-RELATED
Bpl_scaf_2401-2.3
Bpl_scaf_2401-2.4
Bpl_scaf_24011-0.0ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_24012-1.11UNCHARACTERIZED
Bpl_scaf_24012-2.16UNCHARACTERIZED
Bpl_scaf_24012-2.19UNCHARACTERIZED
Bpl_scaf_24012-2.20UNCHARACTERIZED
Bpl_scaf_24012-2.4UNCHARACTERIZED
Bpl_scaf_24012-3.12ANOCTAMIN
Bpl_scaf_24012-3.15
Bpl_scaf_24012-4.6DUF914-RELATED
Bpl_scaf_24012-4.7NUCLEOLAR RNA-ASSOCIATED PROTEIN
Bpl_scaf_24012-4.8SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN
Bpl_scaf_24012-5.12TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12
Bpl_scaf_24012-5.13LYSOSOMAL ACID LIPASE-RELATED
Bpl_scaf_24012-5.24KINESIN-LIKE PROTEIN KLP-3
Bpl_scaf_24012-5.8DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_24020-0.4GTP-BINDING
Bpl_scaf_24035-0.0
Bpl_scaf_24035-0.1
Bpl_scaf_24045-0.15FRIZZLED
Bpl_scaf_24053-0.10PROTEIN CBR-CLEC-78
Bpl_scaf_2407-0.0UPF0428 PROTEIN CXORF56
Bpl_scaf_24070-0.12
Bpl_scaf_24070-0.18SIDESTEP PROTEIN
Bpl_scaf_24074-0.11CYTIDYLYLTRANSFERASE
Bpl_scaf_24074-0.14
Bpl_scaf_24074-0.5
Bpl_scaf_24074-0.7
Bpl_scaf_24074-0.8
Bpl_scaf_24089-0.6CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_24089-0.7
Bpl_scaf_2409-0.2
Bpl_scaf_24104-0.24
Bpl_scaf_24104-0.25
Bpl_scaf_24104-0.26SCAVENGER RECEPTOR CLASS F
Bpl_scaf_24104-0.27
Bpl_scaf_24104-0.29FTP DOMAIN-CONTAINING PROTEIN
Bpl_scaf_2412-0.0INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_24122-0.1
Bpl_scaf_24134-0.1
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