About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_24134-0.7
Bpl_scaf_24134-0.9DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_24144-0.0
Bpl_scaf_24153-0.0
Bpl_scaf_24153-0.1
Bpl_scaf_24153-0.10UNNAMED PRODUCT
Bpl_scaf_24153-0.11
Bpl_scaf_24153-0.12
Bpl_scaf_24153-0.13UNNAMED PRODUCT
Bpl_scaf_24153-0.14
Bpl_scaf_24153-0.15
Bpl_scaf_24153-0.16UNNAMED PRODUCT
Bpl_scaf_24153-0.23UNNAMED PRODUCT
Bpl_scaf_24153-0.24
Bpl_scaf_24153-0.25UNNAMED PRODUCT
Bpl_scaf_24153-0.28UNNAMED PRODUCT
Bpl_scaf_24153-0.41UNNAMED PRODUCT
Bpl_scaf_24153-0.74
Bpl_scaf_24153-0.75UNNAMED PRODUCT
Bpl_scaf_24153-0.76
Bpl_scaf_24163-0.0
Bpl_scaf_24163-0.1
Bpl_scaf_2417-0.0
Bpl_scaf_2417-0.1
Bpl_scaf_2417-0.3
Bpl_scaf_2417-1.14CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_2417-1.17
Bpl_scaf_2417-2.14CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_24171-0.15UNCHARACTERIZED
Bpl_scaf_24171-0.16GMP REDUCTASE
Bpl_scaf_24171-0.17SHORT-CHAIN DEHYDROGENASE/REDUCTASE
Bpl_scaf_24171-0.18CADHERIN-23
Bpl_scaf_24171-0.20
Bpl_scaf_24186-0.12
Bpl_scaf_24186-0.17ANKYRIN REPEAT CONTAINING
Bpl_scaf_24186-0.18SURFACE ANTIGEN BSPA-LIKE-RELATED
Bpl_scaf_24186-0.202-5A-DEPENDENT RIBONUCLEASE
Bpl_scaf_24186-0.23DYMECLIN
Bpl_scaf_24186-0.50FI21293P1
Bpl_scaf_24186-0.51
Bpl_scaf_24186-0.9
Bpl_scaf_2419-0.0
Bpl_scaf_24192-0.15ANKYRIN REPEAT-CONTAINING
Bpl_scaf_24192-0.20
Bpl_scaf_24192-0.22-
Bpl_scaf_24192-0.24
Bpl_scaf_24192-0.40ADHESION G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_24198-0.11METABOTROPIC GLUTAMATE RECEPTOR
Bpl_scaf_24198-0.17SYNTAXIN
Bpl_scaf_24198-0.18LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR
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