About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_2390-1.28F-BOX ONLY PROTEIN 33
Bpl_scaf_23908-0.4
Bpl_scaf_23908-0.5
Bpl_scaf_23908-1.3
Bpl_scaf_23908-1.4ENDONUCLEASE-RELATED
Bpl_scaf_23908-3.10BETA-1,4-GALACTOSYLTRANSFERASE
Bpl_scaf_23908-3.18SULFOTRANSFERASE SULT
Bpl_scaf_23908-3.9
Bpl_scaf_23908-4.1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Bpl_scaf_23908-4.10PROTEIN YELLOW-RELATED
Bpl_scaf_23908-4.14REPRESSOR OF YIELD OF DENV PROTEIN
Bpl_scaf_23908-4.16SULFOTRANSFERASE SULT
Bpl_scaf_23910-0.0ZINC FINGER PROTEIN 200
Bpl_scaf_23917-0.5WD40 REPEAT PROTEIN
Bpl_scaf_23917-0.6PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1
Bpl_scaf_23935-0.10
Bpl_scaf_23950-0.2
Bpl_scaf_23959-0.13SCAVENGER RECEPTOR CLASS F
Bpl_scaf_23959-0.9
Bpl_scaf_23963-0.9IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_23977-0.14CYTOKINE RECEPTOR
Bpl_scaf_23977-0.18CYTOKINE RECEPTOR
Bpl_scaf_2398-0.0
Bpl_scaf_2398-0.1
Bpl_scaf_2398-0.9SERINE / THREONINE RACEMASE FAMILY MEMBER
Bpl_scaf_2398-1.17
Bpl_scaf_2398-1.19LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_2398-1.20
Bpl_scaf_2398-1.21PROTEIN SIDEKICK
Bpl_scaf_2398-1.22
Bpl_scaf_23987-1.10SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP
Bpl_scaf_23987-1.11RABCONNECTIN-RELATED
Bpl_scaf_23987-2.3MEVALONATE KINASE/GALACTOKINASE
Bpl_scaf_23987-2.4MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S30/P52 PRO-APOTOTIC PROTEIN
Bpl_scaf_23987-3.24ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Bpl_scaf_23987-3.25
Bpl_scaf_23987-3.27
Bpl_scaf_23987-3.7ARCHAEMETZINCIN
Bpl_scaf_23987-3.8ARCHAEMETZINCIN
Bpl_scaf_23987-4.16
Bpl_scaf_23987-4.19PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE
Bpl_scaf_23987-4.20L-ASPARAGINASE
Bpl_scaf_23987-4.21PROTEIN FAM227B
Bpl_scaf_23987-4.26MATRIX PROTEIN, PUTATIVE-RELATED
Bpl_scaf_23987-4.29
Bpl_scaf_24-0.2
Bpl_scaf_24-0.6
Bpl_scaf_24001-0.27CEREBELLIN-RELATED
Bpl_scaf_24001-0.28CEREBELLIN-RELATED
Bpl_scaf_24001-0.29CEREBELLIN-RELATED
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