Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8058473.1 | |
| CAI8058472.1 | |
| CAI8058471.1 | CREB-REGULATED TRANSCRIPTION COACTIVATOR |
| CAI8058470.1 | |
| CAI8058475.1 | |
| CAI8058478.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8058477.1 | |
| CAI8058476.1 | |
| CAI8058479.1 | |
| CAI8058486.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| CAI8058487.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| CAI8058485.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| CAI8058484.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| CAI8058483.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| CAI8058482.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| CAI8058481.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| CAI8058480.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| CAI8058488.1 | C2 DOMAIN-CONTAINING PROTEIN |
| CAI8058490.1 | |
| CAI8058489.1 | |
| CAI8058491.1 | |
| CAI8058492.1 | |
| CAI8058493.1 | |
| CAI8058495.1 | KELCH PROTEIN |
| CAI8058494.1 | |
| CAI8058497.1 | |
| CAI8058496.1 | |
| CAI8058498.1 | |
| CAI8058499.1 | |
| CAI8058501.1 | |
| CAI8058500.1 | |
| CAI8058502.1 | |
| CAI8058503.1 | |
| CAI8058505.1 | RIBOSOMAL PROTEIN L19 |
| CAI8058504.1 | |
| CAI8058506.1 | |
| CAI8058507.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8058509.1 | |
| CAI8058510.1 | |
| CAI8058508.1 | |
| CAI8058511.1 | I_LWEQ DOMAIN-CONTAINING PROTEIN |
| CAI8058514.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8058513.1 | ANKYRIN DOMAIN-CONTAINING |
| CAI8058512.1 | ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1 |
| CAI8058515.1 | ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1 |
| CAI8058516.1 | |
| CAI8058519.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 13 |
| CAI8058518.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 13 |
| CAI8058520.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 13 |
| CAI8058521.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 13 |
