About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_20947-0.5HELIX LOOP HELIX PROTEIN 21-RELATED
Bpl_scaf_20952-0.2
Bpl_scaf_20952-1.4
Bpl_scaf_20952-10.14
Bpl_scaf_20952-10.18
Bpl_scaf_20952-12.1
Bpl_scaf_20952-12.17BLR2807 PROTEIN
Bpl_scaf_20952-12.24EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Bpl_scaf_20952-12.4
Bpl_scaf_20952-2.8GUANYLYL CYCLASE
Bpl_scaf_20952-2.9HILLARIN
Bpl_scaf_20952-3.11CRUMBS FAMILY MEMBER
Bpl_scaf_20952-3.12
Bpl_scaf_20952-4.6RCC1-LIKE G EXCHANGING FACTOR-LIKE PROTEIN
Bpl_scaf_20952-5.0
Bpl_scaf_20952-5.2TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_20952-6.0
Bpl_scaf_20952-7.14PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4
Bpl_scaf_20952-8.14
Bpl_scaf_20952-8.15PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4
Bpl_scaf_20952-9.1
Bpl_scaf_20952-9.4
Bpl_scaf_20957-0.1
Bpl_scaf_20957-0.2
Bpl_scaf_20957-0.3
Bpl_scaf_2096-0.6
Bpl_scaf_2096-0.7
Bpl_scaf_20966-0.2
Bpl_scaf_20999-0.8MOLTING PROTEIN MLT-4
Bpl_scaf_21-0.2CHITIN SYNTHASE
Bpl_scaf_21008-0.3SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Bpl_scaf_21020-0.3
Bpl_scaf_21020-0.4
Bpl_scaf_21020-0.6UNCHARACTERIZED
Bpl_scaf_21030-0.5SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3
Bpl_scaf_21030-0.8DNAJ HOMOLOG SUBFAMILY B MEMBER 9
Bpl_scaf_21031-0.1CARBOXYLIC ESTER HYDROLASE
Bpl_scaf_21031-0.2ZINC FINGER PROTEIN
Bpl_scaf_21031-0.36ALKYL/ARYL-SULFATASE
Bpl_scaf_21031-1.11PROTEIN EVA-1
Bpl_scaf_21031-1.9BETA-HEXOSAMINIDASE
Bpl_scaf_21031-2.1CEREBELLIN-RELATED
Bpl_scaf_21031-2.6BETA-HEXOSAMINIDASE
Bpl_scaf_21031-4.16UNCHARACTERIZED
Bpl_scaf_21031-4.17AMINO ACID TRANSPORTER
Bpl_scaf_21031-4.29
Bpl_scaf_21031-4.30
Bpl_scaf_21031-4.31
Bpl_scaf_21031-4.9
Bpl_scaf_21041-0.11
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