About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_20867-0.7NEUROLIGIN
Bpl_scaf_20868-0.3VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
Bpl_scaf_20869-0.4
Bpl_scaf_20869-0.5NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_20869-0.8CXC DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_20869-0.9
Bpl_scaf_20869-1.1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_20869-1.3
Bpl_scaf_20869-2.10
Bpl_scaf_20869-2.11LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
Bpl_scaf_20869-3.12
Bpl_scaf_20869-3.3LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
Bpl_scaf_20869-3.7HOMEO BOX HB9 LIKE A-RELATED
Bpl_scaf_20869-3.8HOMEO BOX HB9 LIKE A-RELATED
Bpl_scaf_2087-0.12PROTEIN TORNADO 1
Bpl_scaf_2087-0.13
Bpl_scaf_2087-0.9
Bpl_scaf_20872-0.0
Bpl_scaf_20873-0.0
Bpl_scaf_20874-0.0
Bpl_scaf_20877-0.26ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_20878-0.4
Bpl_scaf_20880-1.17UDP/ADP-SUGAR PYROPHOSPHATASE
Bpl_scaf_20880-1.18
Bpl_scaf_20880-1.19
Bpl_scaf_20880-2.4
Bpl_scaf_20880-2.7
Bpl_scaf_20880-3.0
Bpl_scaf_20880-3.3NEUROPEPTIDE Y RECEPTOR
Bpl_scaf_20880-3.6NEUROPEPTIDE Y RECEPTOR
Bpl_scaf_20882-0.0
Bpl_scaf_20886-0.2
Bpl_scaf_20887-0.0EPIMERASE-RELATED
Bpl_scaf_20890-0.6
Bpl_scaf_20890-1.326S PROTEASOME NON-ATPASE REGULATORY SUBUNIT
Bpl_scaf_20890-2.05-HYDROXYTRYPTAMINE RECEPTOR
Bpl_scaf_20890-2.2ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_20890-3.12DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Bpl_scaf_20890-3.1326S PROTEASOME NON-ATPASE REGULATORY SUBUNIT
Bpl_scaf_20890-3.16ZINC FINGER PROTEIN
Bpl_scaf_20890-3.26ZINC FINGER PROTEIN
Bpl_scaf_20890-3.29
Bpl_scaf_20890-3.4
Bpl_scaf_20890-3.7PLASMINOGEN-RELATED
Bpl_scaf_20890-3.8LEUCINE RICH REPEAT FAMILY PROTEIN
Bpl_scaf_20896-0.0
Bpl_scaf_20911-0.3
Bpl_scaf_20922-0.3
Bpl_scaf_20940-0.0
Bpl_scaf_20947-0.0HELIX LOOP HELIX PROTEIN 21-RELATED
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