Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s008.g0197.t1 | |
Lsat_s008.g0198.t1 | |
Lsat_s008.g0199.t1 | OS05G0300700 PROTEIN |
Lsat_s008.g0200.t1 | |
Lsat_s008.g0201.t1 | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD |
Lsat_s008.g0202.t1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
Lsat_s008.g0203.t1 | F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED |
Lsat_s008.g0204.t1 | AAA-FAMILY ATPASE |
Lsat_s008.g0205.t1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Lsat_s008.g0206.t1 | |
Lsat_s008.g0207.t1 | |
Lsat_s008.g0208.t1 | |
Lsat_s008.g0209.t1 | |
Lsat_s008.g0210.t1 | |
Lsat_s008.g0211.t1 | SAND PROTEIN-RELATED |
Lsat_s008.g0212.t1 | MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED |
Lsat_s008.g0213.t1 | MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED |
Lsat_s008.g0214.t1 | MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED |
Lsat_s008.g0215.t1 | DYNEIN REGULATORY COMPLEX SUBUNIT 7 |
Lsat_s008.g0216.t1 | UNCHARACTERIZED |
Lsat_s008.g0217.t1 | |
Lsat_s008.g0218.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s008.g0219.t1 | |
Lsat_s008.g0220.t1 | |
Lsat_s008.g0221.t1 | PHD/F-BOX CONTAINING PROTEIN |
Lsat_s008.g0222.t1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
Lsat_s008.g0223.t1 | MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED |
Lsat_s008.g0224.t1 | |
Lsat_s008.g0225.t1 | NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSED |
Lsat_s008.g0226.t1 | THYROTROPH EMBRYONIC FACTOR RELATED |
Lsat_s008.g0227.t1 | |
Lsat_s008.g0228.t1 | |
Lsat_s008.g0229.t1 | |
Lsat_s008.g0230.t1 | RHO FAMILY GTPASE |
Lsat_s008.g0231.t1 | |
Lsat_s008.g0232.t1 | MITOCHONDRIAL INNER MEMBRANE PROTEASE |
Lsat_s008.g0233.t1 | NITROGEN PERMEASE REGULATOR 2/TUMOR SUPPRESSOR CANDIDATE 4 |
Lsat_s008.g0234.t1 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
Lsat_s008.g0235.t1 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
Lsat_s008.g0236.t1 | |
Lsat_s008.g0237.t1 | |
Lsat_s008.g0238.t1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
Lsat_s008.g0239.t1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Lsat_s008.g0240.t1 | |
Lsat_s008.g0241.t1 | |
Lsat_s008.g0242.t1 | |
Lsat_s008.g0243.t1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Lsat_s008.g0244.t1 | GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP |
Lsat_s008.g0245.t1 | KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG |
Lsat_s008.g0246.t1 | MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED |