Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s008.g0147.t1 | |
Lsat_s008.g0148.t1 | |
Lsat_s008.g0149.t1 | FORMIN-J |
Lsat_s008.g0150.t1 | CYTOCHROME P450 FAMILY 7 |
Lsat_s008.g0151.t1 | CYTOCHROME P450 FAMILY 7 |
Lsat_s008.g0152.t1 | |
Lsat_s008.g0153.t1 | |
Lsat_s008.g0154.t1 | UPSET, ISOFORM A |
Lsat_s008.g0155.t1 | CALCIUM-DEPENDENT SECRETION ACTIVATOR |
Lsat_s008.g0156.t1 | ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1 |
Lsat_s008.g0157.t1 | NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2 |
Lsat_s008.g0158.t1 | |
Lsat_s008.g0159.t1 | RENTINAL DEGENERATION 3-LIKE |
Lsat_s008.g0160.t1 | PROLINE-RICH TRANSMEMBRANE PROTEIN 4-RELATED |
Lsat_s008.g0161.t1 | CADHERIN-87A |
Lsat_s008.g0162.t1 | CADHERIN-87A |
Lsat_s008.g0163.t1 | ZINC FINGER PROTEIN RLF |
Lsat_s008.g0164.t1 | RIBOPHORIN I |
Lsat_s008.g0165.t1 | IMPORTIN-7, 8, 11 |
Lsat_s008.g0166.t1 | ADP RIBOSYLATION FACTOR-RELATED |
Lsat_s008.g0167.t1 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 3 |
Lsat_s008.g0168.t1 | ADP RIBOSYLATION FACTOR-RELATED |
Lsat_s008.g0169.t1 | MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED |
Lsat_s008.g0170.t1 | |
Lsat_s008.g0171.t1 | MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED |
Lsat_s008.g0172.t1 | |
Lsat_s008.g0173.t1 | CADHERIN-87A |
Lsat_s008.g0174.t1 | SLEI FAMILY PROTEIN |
Lsat_s008.g0175.t1 | |
Lsat_s008.g0176.t1 | |
Lsat_s008.g0177.t1 | |
Lsat_s008.g0178.t1 | |
Lsat_s008.g0179.t1 | CADHERIN-87A |
Lsat_s008.g0180.t1 | SHISA |
Lsat_s008.g0181.t1 | |
Lsat_s008.g0182.t1 | |
Lsat_s008.g0183.t1 | ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Lsat_s008.g0184.t1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Lsat_s008.g0185.t1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Lsat_s008.g0186.t1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Lsat_s008.g0187.t1 | |
Lsat_s008.g0188.t1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Lsat_s008.g0189.t1 | OS01G0253100 PROTEIN |
Lsat_s008.g0190.t1 | U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2 |
Lsat_s008.g0191.t1 | UNCHARACTERIZED |
Lsat_s008.g0192.t1 | PROPERDIN |
Lsat_s008.g0193.t1 | |
Lsat_s008.g0194.t1 | UNCHARACTERIZED |
Lsat_s008.g0195.t1 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
Lsat_s008.g0196.t1 | MIR DOMAIN-CONTAINING PROTEIN |