About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s008.g0147.t1
Lsat_s008.g0148.t1
Lsat_s008.g0149.t1FORMIN-J
Lsat_s008.g0150.t1CYTOCHROME P450 FAMILY 7
Lsat_s008.g0151.t1CYTOCHROME P450 FAMILY 7
Lsat_s008.g0152.t1
Lsat_s008.g0153.t1
Lsat_s008.g0154.t1UPSET, ISOFORM A
Lsat_s008.g0155.t1CALCIUM-DEPENDENT SECRETION ACTIVATOR
Lsat_s008.g0156.t1ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1
Lsat_s008.g0157.t1NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2
Lsat_s008.g0158.t1
Lsat_s008.g0159.t1RENTINAL DEGENERATION 3-LIKE
Lsat_s008.g0160.t1PROLINE-RICH TRANSMEMBRANE PROTEIN 4-RELATED
Lsat_s008.g0161.t1CADHERIN-87A
Lsat_s008.g0162.t1CADHERIN-87A
Lsat_s008.g0163.t1ZINC FINGER PROTEIN RLF
Lsat_s008.g0164.t1RIBOPHORIN I
Lsat_s008.g0165.t1IMPORTIN-7, 8, 11
Lsat_s008.g0166.t1ADP RIBOSYLATION FACTOR-RELATED
Lsat_s008.g0167.t1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 3
Lsat_s008.g0168.t1ADP RIBOSYLATION FACTOR-RELATED
Lsat_s008.g0169.t1MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED
Lsat_s008.g0170.t1
Lsat_s008.g0171.t1MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED
Lsat_s008.g0172.t1
Lsat_s008.g0173.t1CADHERIN-87A
Lsat_s008.g0174.t1SLEI FAMILY PROTEIN
Lsat_s008.g0175.t1
Lsat_s008.g0176.t1
Lsat_s008.g0177.t1
Lsat_s008.g0178.t1
Lsat_s008.g0179.t1CADHERIN-87A
Lsat_s008.g0180.t1SHISA
Lsat_s008.g0181.t1
Lsat_s008.g0182.t1
Lsat_s008.g0183.t1ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
Lsat_s008.g0184.t1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Lsat_s008.g0185.t1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Lsat_s008.g0186.t1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Lsat_s008.g0187.t1
Lsat_s008.g0188.t1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Lsat_s008.g0189.t1OS01G0253100 PROTEIN
Lsat_s008.g0190.t1U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2
Lsat_s008.g0191.t1UNCHARACTERIZED
Lsat_s008.g0192.t1PROPERDIN
Lsat_s008.g0193.t1
Lsat_s008.g0194.t1UNCHARACTERIZED
Lsat_s008.g0195.t1RYANODINE RECEPTOR AND IP3 RECEPTOR
Lsat_s008.g0196.t1MIR DOMAIN-CONTAINING PROTEIN
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