Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s008.g0347.t1 | BAX INHIBITOR-RELATED |
Lsat_s008.g0348.t1 | DEOXYRIBONUCLEASE |
Lsat_s008.g0349.t1 | DEOXYRIBONUCLEASE |
Lsat_s008.g0350.t1 | HAUS AUGMIN-LIKE COMPLEX SUBUNIT 7 |
Lsat_s008.g0351.t1 | HEXAMETHYLENE BISACETAMIDE INDUCIBLE 1 |
Lsat_s008.g0352.t1 | INTERFERON-RELATED DEVELOPMENTAL REGULATOR |
Lsat_s008.g0353.t1 | SORTING NEXIN FAMILY MEMBER |
Lsat_s008.g0354.t1 | |
Lsat_s008.g0355.t1 | |
Lsat_s008.g0356.t1 | UNCHARACTERIZED |
Lsat_s008.g0357.t1 | CENTROSOMAL PROTEIN OF 170 KDA |
Lsat_s008.g0358.t1 | MANNOSIDASE, BETA A, LYSOSOMAL-LIKE, MANBAL PROTEIN |
Lsat_s008.g0359.t1 | |
Lsat_s008.g0360.t1 | ANKYRIN REPEAT PROTEIN |
Lsat_s008.g0361.t1 | POTE ANKYRIN DOMAIN |
Lsat_s008.g0362.t1 | POTE ANKYRIN DOMAIN |
Lsat_s008.g0363.t1 | DEOXYRIBONUCLEASE |
Lsat_s008.g0364.t1 | PRE-MRNA-SPLICING FACTOR ISY1 |
Lsat_s008.g0365.t1 | |
Lsat_s008.g0366.t1 | HMG BOX-CONTAINING PROTEIN 1 |
Lsat_s008.g0367.t1 | CENTROMERE PROTEIN K |
Lsat_s008.g0368.t1 | PROTEIN BARK BEETLE |
Lsat_s008.g0369.t1 | CADHERIN-23 |
Lsat_s008.g0370.t1 | CADHERIN-23 |
Lsat_s008.g0371.t1 | CADHERIN-23 |
Lsat_s008.g0372.t1 | |
Lsat_s008.g0373.t1 | CADHERIN-87A |
Lsat_s008.g0374.t1 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Lsat_s008.g0375.t1 | MULTICOPPER OXIDASE-RELATED |
Lsat_s008.g0376.t1 | COPINE |
Lsat_s008.g0377.t1 | |
Lsat_s008.g0378.t1 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
Lsat_s008.g0379.t1 | |
Lsat_s008.g0380.t1 | SPORE COAT PROTEIN SP85 |
Lsat_s008.g0381.t1 | |
Lsat_s008.g0382.t1 | |
Lsat_s008.g0383.t1 | MUSKELIN |
Lsat_s008.g0384.t1 | CARNITINE O-ACYLTRANSFERASE |
Lsat_s008.g0385.t1 | CARNITINE O-ACYLTRANSFERASE |
Lsat_s008.g0386.t1 | |
Lsat_s008.g0387.t1 | CARNITINE O-ACYLTRANSFERASE |
Lsat_s008.g0388.t1 | ZINC FINGER PROTEIN |
Lsat_s008.g0389.t1 | |
Lsat_s008.g0390.t1 | NUCLEAR PROTEIN E3-3 |
Lsat_s008.g0391.t1 | |
Lsat_s008.g0392.t1 | HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H |
Lsat_s008.g0393.t1 | DYSTROGLYCAN-RELATED |
Lsat_s008.g0394.t1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 3 |
Lsat_s008.g0395.t1 | |
Lsat_s008.g0396.t1 | UROCANATE HYDRATASE |