Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s008.g0397.t1 | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED |
| Lsat_s008.g0398.t1 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Lsat_s008.g0399.t1 | GLUTATHIONE REDUCTASE |
| Lsat_s008.g0400.t1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
| Lsat_s008.g0401.t1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| Lsat_s008.g0402.t1 | |
| Lsat_s008.g0403.t1 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Lsat_s008.g0404.t1 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Lsat_s008.g0405.t1 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Lsat_s008.g0406.t1 | INTELECTIN |
| Lsat_s008.g0407.t1 | |
| Lsat_s008.g0408.t1 | PROTON MYO-INOSITOL COTRANSPORTER |
| Lsat_s008.g0409.t1 | IKB KINASE |
| Lsat_s008.g0410.t1 | |
| Lsat_s008.g0411.t1 | |
| Lsat_s008.g0412.t1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Lsat_s008.g0413.t1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Lsat_s008.g0414.t1 | |
| Lsat_s008.g0415.t1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Lsat_s008.g0416.t1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Lsat_s008.g0417.t1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Lsat_s008.g0418.t1 | PLEXIN |
| Lsat_s008.g0419.t1 | |
| Lsat_s008.g0420.t1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| Lsat_s008.g0421.t1 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
| Lsat_s008.g0422.t1 | |
| Lsat_s008.g0423.t1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
| Lsat_s008.g0424.t1 | E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED |
| Lsat_s008.g0425.t1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| Lsat_s008.g0426.t1 | |
| Lsat_s008.g0427.t1 | AP ENDONUCLEASE |
| Lsat_s008.g0428.t1 | LAMINA-ASSOCIATED POLYPEPTIDE THYMOPOIETIN |
| Lsat_s008.g0429.t1 | PX SERINE/THREONINE KINASE PXK |
| Lsat_s008.g0430.t1 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 |
| Lsat_s008.g0431.t1 | |
| Lsat_s008.g0432.t1 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 |
| Lsat_s008.g0433.t1 | PROTON MYO-INOSITOL COTRANSPORTER |
| Lsat_s008.g0434.t1 | |
| Lsat_s008.g0435.t1 | |
| Lsat_s008.g0436.t1 | G-PROTEIN COUPLED RECEPTOR |
| Lsat_s008.g0437.t1 | |
| Lsat_s008.g0438.t1 | |
| Lsat_s008.g0439.t1 | |
| Lsat_s008.g0440.t1 | |
| Lsat_s008.g0441.t1 | IMIDAZOLONEPROPIONASE |
| Lsat_s008.g0442.t1 | HISTIDINE AMMONIA-LYASE |
| Lsat_s008.g0443.t1 | WNT RELATED |
| Lsat_s008.g0444.t1 | CADHERIN-LIKE AND PC-ESTERASE DOMAIN-CONTAINING PROTEIN 1 |
| Lsat_s008.g0445.t1 | SI:DKEY-192D15.2-RELATED |
| Lsat_s008.g0446.t1 |
