About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_16915-0.0
Bpl_scaf_16915-0.1HISTONE H1
Bpl_scaf_16915-0.2HISTONE H1
Bpl_scaf_16915-1.2
Bpl_scaf_16915-1.27SOLUTE CARRIER FAMILY 17
Bpl_scaf_16915-1.3
Bpl_scaf_16915-1.33
Bpl_scaf_16915-1.34CALPAIN
Bpl_scaf_16915-2.7BONUS, ISOFORM C-RELATED
Bpl_scaf_16915-2.8
Bpl_scaf_16915-4.14RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_16915-4.15MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN
Bpl_scaf_16927-0.10DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
Bpl_scaf_16927-0.16UNCHARACTERIZED
Bpl_scaf_16935-0.0
Bpl_scaf_16935-0.1
Bpl_scaf_16935-0.10INHIBITOR OF APOPTOSIS
Bpl_scaf_16935-0.14INHIBITOR OF APOPTOSIS
Bpl_scaf_16935-0.17PROPERDIN
Bpl_scaf_16951-0.14CEREBELLIN-RELATED
Bpl_scaf_16951-0.16E3 UBIQUITIN-PROTEIN LIGASE TRIM
Bpl_scaf_16951-0.17CEREBELLIN-RELATED
Bpl_scaf_16951-0.18CEREBELLIN-RELATED
Bpl_scaf_16961-0.8
Bpl_scaf_16961-0.9
Bpl_scaf_16961-1.6ACR243WP
Bpl_scaf_16961-10.0
Bpl_scaf_16961-11.5UNCHARACTERIZED
Bpl_scaf_16961-11.6
Bpl_scaf_16961-12.7CADHERIN-LIKE AND PC-ESTERASE DOMAIN-CONTAINING PROTEIN 1
Bpl_scaf_16961-12.8SERINE-THREONINE PROTEIN KINASE
Bpl_scaf_16961-12.9TRYPTASE-RELATED
Bpl_scaf_16961-13.19SMALL LYSINE-RICH PROTEIN 1
Bpl_scaf_16961-13.8PROTEIN REQUIRED FOR HYPHAL ANASTOMOSIS HAM-2
Bpl_scaf_16961-13.9ZINC FINGER PROTEIN
Bpl_scaf_16961-14.12
Bpl_scaf_16961-14.14GUANYLATE KINASE-RELATED
Bpl_scaf_16961-14.15COATOMER SUBUNIT GAMMA
Bpl_scaf_16961-14.16PERIOSTIN-RELATED
Bpl_scaf_16961-14.35MITOCHONDRIAL RIBOSOMAL PROTEIN S33
Bpl_scaf_16961-14.8DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED
Bpl_scaf_16961-15.13
Bpl_scaf_16961-15.14CGI-121 FAMILY MEMBER
Bpl_scaf_16961-15.16ECTOPIC P GRANULES PROTEIN 5 HOMOLOG
Bpl_scaf_16961-15.23HOMEOBOX PROTEIN
Bpl_scaf_16961-15.25
Bpl_scaf_16961-15.7GLYCOSYLTRANSFERASE
Bpl_scaf_16961-3.10PROTEIN SSUH2 HOMOLOG
Bpl_scaf_16961-4.15ATP SYNTHASE GAMMA CHAIN
Bpl_scaf_16961-4.16ATP SYNTHASE GAMMA CHAIN
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