About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_16831-13.14
Bpl_scaf_16831-13.26
Bpl_scaf_16831-13.3
Bpl_scaf_16831-13.36DNA POLYMERASE
Bpl_scaf_16831-13.37
Bpl_scaf_16831-13.44
Bpl_scaf_16831-2.11
Bpl_scaf_16831-2.13
Bpl_scaf_16831-2.19DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_16831-2.20
Bpl_scaf_16831-2.21
Bpl_scaf_16831-3.1
Bpl_scaf_16831-3.19
Bpl_scaf_16831-3.20
Bpl_scaf_16831-3.21ZGC:195170
Bpl_scaf_16831-3.31DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_16831-4.7ATP-DEPENDENT DNA HELICASE
Bpl_scaf_16831-5.6
Bpl_scaf_16831-5.7
Bpl_scaf_16831-6.10LITHOSTATHINE
Bpl_scaf_16831-6.12MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
Bpl_scaf_16831-6.13MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
Bpl_scaf_16831-6.5
Bpl_scaf_16831-6.6
Bpl_scaf_16831-7.10LITHOSTATHINE
Bpl_scaf_16831-7.11UNCHARACTERIZED
Bpl_scaf_16831-7.7LITHOSTATHINE
Bpl_scaf_16831-8.5ACID PHOSPHATASE-RELATED
Bpl_scaf_16831-8.6
Bpl_scaf_16831-9.14.1 G PROTEIN
Bpl_scaf_16848-0.6
Bpl_scaf_16875-0.1SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Bpl_scaf_16875-0.2
Bpl_scaf_16875-0.5SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Bpl_scaf_16889-0.3AGAP001331-PA-RELATED
Bpl_scaf_16889-0.6PHD FINGER PROTEINS
Bpl_scaf_1690-0.13SACSIN
Bpl_scaf_1690-0.8SACSIN
Bpl_scaf_16900-0.10RAN BINDING PROTEIN
Bpl_scaf_16900-0.14BAND 7 PROTEIN-RELATED
Bpl_scaf_16900-0.15RAN BINDING PROTEIN
Bpl_scaf_16905-0.26MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_16905-0.28MACROGLOBULIN / COMPLEMENT
Bpl_scaf_16905-0.33MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_16905-0.34MACROGLOBULIN / COMPLEMENT
Bpl_scaf_16914-0.0
Bpl_scaf_16914-0.14
Bpl_scaf_16914-0.17
Bpl_scaf_16914-0.18
Bpl_scaf_16914-0.4
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