About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_16451-1.36
Bpl_scaf_16451-1.37
Bpl_scaf_16451-1.39
Bpl_scaf_16451-1.40EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Bpl_scaf_16456-0.0
Bpl_scaf_1646-0.16
Bpl_scaf_1646-0.17MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
Bpl_scaf_1646-0.18MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED
Bpl_scaf_16463-1.3
Bpl_scaf_16463-1.6ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27
Bpl_scaf_16463-1.9ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27
Bpl_scaf_16463-2.12
Bpl_scaf_16463-2.17UNCHARACTERIZED
Bpl_scaf_16463-2.18RHOPHILIN
Bpl_scaf_16463-2.31PUTATIVE-RELATED
Bpl_scaf_16464-0.2
Bpl_scaf_16464-1.11
Bpl_scaf_16464-1.12SINGLE-STRANDED DNA-BINDING PROTEIN
Bpl_scaf_16464-1.19SYNAPTIC VESICLE GLYCOPROTEIN 2
Bpl_scaf_16464-1.8HEH2P
Bpl_scaf_16464-2.14POLYCYSTIN FAMILY MEMBER
Bpl_scaf_16464-2.15POLYCYSTIN FAMILY MEMBER
Bpl_scaf_16464-2.20
Bpl_scaf_16464-4.11POLYCOMB GROUP PROTEIN PC
Bpl_scaf_16464-4.4LEUCOKININ RECEPTOR-RELATED
Bpl_scaf_16464-5.0
Bpl_scaf_16464-5.3TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13
Bpl_scaf_16464-6.3REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_16464-6.4
Bpl_scaf_16464-6.7SIDESTEP PROTEIN
Bpl_scaf_16464-7.12
Bpl_scaf_16464-7.21
Bpl_scaf_16464-7.22POLYCYSTIN FAMILY MEMBER
Bpl_scaf_16464-8.11TMEM26 PROTEIN
Bpl_scaf_16464-8.2
Bpl_scaf_16464-8.7AT29763P-RELATED
Bpl_scaf_16464-8.8
Bpl_scaf_16464-9.12DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11
Bpl_scaf_16466-0.0
Bpl_scaf_16473-0.0
Bpl_scaf_16474-0.0
Bpl_scaf_16474-0.15UNNAMED PRODUCT
Bpl_scaf_16474-0.27UNNAMED PRODUCT
Bpl_scaf_16474-0.28UNNAMED PRODUCT
Bpl_scaf_16474-0.4UNNAMED PRODUCT
Bpl_scaf_16474-0.5UNNAMED PRODUCT
Bpl_scaf_16474-0.8UNNAMED PRODUCT
Bpl_scaf_16474-1.10
Bpl_scaf_16474-1.13UNCHARACTERIZED
Bpl_scaf_16474-1.16ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE
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