About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_15982-2.9PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL
Bpl_scaf_15982-3.22CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR
Bpl_scaf_15982-3.25RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_15982-3.3
Bpl_scaf_15982-3.34PERIOSTIN-RELATED
Bpl_scaf_15982-3.35-
Bpl_scaf_15982-3.36
Bpl_scaf_15982-3.4
Bpl_scaf_15983-0.11CHARGED MULTIVESICULAR BODY PROTEIN
Bpl_scaf_15983-0.12HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Bpl_scaf_15983-0.15SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASE
Bpl_scaf_15983-1.10ISOAMYL ACETATE-HYDROLYZING ESTERASE 1
Bpl_scaf_15983-1.12ACYL-COA DEHYDROGENASE
Bpl_scaf_15983-1.9WD40 REPEAT PF20
Bpl_scaf_15983-2.3
Bpl_scaf_15983-2.8
Bpl_scaf_15983-2.9
Bpl_scaf_15983-3.3
Bpl_scaf_15983-4.14THAP DOMAIN PROTEIN
Bpl_scaf_15983-4.23EXPRESSED PROTEIN
Bpl_scaf_15983-4.24
Bpl_scaf_15993-0.0
Bpl_scaf_1600-0.10
Bpl_scaf_1600-0.11
Bpl_scaf_1600-0.7
Bpl_scaf_1600-0.9KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY B MEMBER 1
Bpl_scaf_16004-0.2
Bpl_scaf_16004-0.3
Bpl_scaf_16031-0.2
Bpl_scaf_16041-0.1PROTEIN CBG23764
Bpl_scaf_16041-1.1DEOXYRIBONUCLEASE TATDN2-RELATED
Bpl_scaf_16041-2.0PROTEIN STAR
Bpl_scaf_16041-2.18N-ACETYLTRANSFERASE 6
Bpl_scaf_16041-2.19UNCHARACTERIZED
Bpl_scaf_16041-2.5
Bpl_scaf_16041-2.9CATION TRANSPORT PROTEIN CHAC-RELATED
Bpl_scaf_16041-3.2
Bpl_scaf_16041-3.3TSEC-2-RELATED
Bpl_scaf_16041-4.14HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
Bpl_scaf_16041-4.15TRICALBIN-1-RELATED
Bpl_scaf_16041-4.16C2 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_16041-4.17
Bpl_scaf_16041-4.8GAMMA GLUTAMYL TRANSPEPTIDASE
Bpl_scaf_16053-0.10
Bpl_scaf_16053-0.8
Bpl_scaf_16054-0.10DUAL OXIDASE 2
Bpl_scaf_16054-0.11COPROPORPHYRINIGEN III OXIDASE
Bpl_scaf_16054-0.9HL07962P-RELATED
Bpl_scaf_16054-1.6TUBERIN
Bpl_scaf_16054-2.21UNKEMPT FAMILY MEMBER
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