About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 661 662 663 664 665 666 667 668 669 670 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_036013-T1IQ DOMAIN-CONTAINING PROTEIN K
OS493_036014-T1POLYCOMB GROUP PROTEIN
OS493_036015-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
OS493_036016-T1
OS493_036018-T1VHS DOMAIN CONTAINING PROTEIN FAMILY
OS493_036019-T1PROTEIN PM1
OS493_036020-T1
OS493_036021-T1-
OS493_036022-T1SERINE/THREONINE-PROTEIN KINASE
OS493_036023-T1UBIQUITIN-CONJUGATING ENZYME E2
OS493_036024-T1DOPAMINE BETA HYDROXYLASE RELATED
OS493_036025-T1DOPAMINE BETA HYDROXYLASE RELATED
OS493_036026-T1DOPAMINE BETA HYDROXYLASE RELATED
OS493_036027-T1DOPAMINE BETA HYDROXYLASE RELATED
OS493_036028-T1DOPAMINE BETA HYDROXYLASE RELATED
OS493_036029-T1DRAB11-RELATED
OS493_036031-T1
OS493_036032-T1TRICHOHYALIN-RELATED
OS493_036033-T1
OS493_036034-T1TRICHOHYALIN-RELATED
OS493_036035-T1
OS493_036036-T1BETA-AMYLOID BINDING PROTEIN-RELATED
OS493_036037-T1SYNTAXIN-18
OS493_036038-T1
OS493_036039-T1DNA REPLICATION REGULATOR DPB11-RELATED
OS493_036040-T1TRNA DIMETHYLALLYLTRANSFERASE
OS493_036041-T1PROTEIN DPCD
OS493_036043-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
OS493_036044-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_036045-T1DRAB11-RELATED
OS493_036046-T1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
OS493_036047-T1PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5
OS493_036048-T1PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5
OS493_036049-T1ADULT RETINA PROTEIN
OS493_036050-T1
OS493_036051-T1LEUCOKININ RECEPTOR-RELATED
OS493_036052-T1SCAVENGER RECEPTOR DOMAIN-CONTAINING
OS493_036053-T1PROTEIN DPCD
OS493_036054-T1
OS493_036055-T1
OS493_036056-T1KINESIN-RELATED
OS493_036057-T1HEMOGLOBINASE FAMILY MEMBER
OS493_036058-T1PROTEASOME SUBUNIT ALPHA/BETA
OS493_036059-T1
OS493_036060-T1G PROTEIN-COUPLED RECEPTOR-RELATED
OS493_036063-T1
OS493_036066-T1MED-6-RELATED
OS493_036068-T1
OS493_036069-T1ACETYL-COENZYME A SYNTHETASE
OS493_036070-T1ACETYL-COENZYME A SYNTHETASE
TOP