About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.

Classification

Animalia (Kingdom); Porifera (Phylum); Demospongiae (Class); Heteroscleromorpha (Subclass); Tetractinellida (Order); Astrophorina (Suborder); Geodiidae (Family); Geodiinae (Subfamily); Geodia (Genus); Geodia barretti (Species)

Original Name

Geodia barretti Bowerbank, 1858

Original Description/Redescription

1. Bowerbank J S. On the Anatomy and Physiology of the Spongiadae[J]. Proceedings of the Royal Society of London, 1856, 8: 573-577. (Bowerbank et al., 1858)
2. Cárdenas P, Rapp H T, Klitgaard A B, et al. Taxonomy, biogeography and DNA barcodes of Geodia species (Porifera, Demospongiae, Tetractinellida) in the Atlantic boreo-arctic region[J]. Zoological Journal of the Linnean Society, 2013, 169(2): 251-311. (Cárdenas et al., 2013)

Partial Description

the generally smooth surface (absence of hispidity and epibionts) and white colour. The irregular form, especially in specimens larger than about 15 cm in diameter. The clearly visible sieves in the sometimes numerous preoscular cavities. Spicules: usually dichotriaenes and strongylasters

Distribution/Locality

Geodia barretti has been found at depths from 30 to 2000 m.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50 48.449.319.0531,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8026671.1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA
CAI8026672.1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA
CAI8026673.1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA
CAI8026676.1GLYCOLIPID TRANSFER PROTEIN-RELATED
CAI8026675.1GLYCOLIPID TRANSFER PROTEIN-RELATED
CAI8026674.1GLYCOLIPID TRANSFER PROTEIN-RELATED
CAI8026677.1GLYCOLIPID TRANSFER PROTEIN-RELATED
CAI8026692.1SODIUM/CALCIUM EXCHANGER
CAI8026691.1SODIUM/CALCIUM EXCHANGER
CAI8026688.1SODIUM/CALCIUM EXCHANGER
CAI8026689.1SODIUM/CALCIUM EXCHANGER
CAI8026690.1SODIUM/CALCIUM EXCHANGER
CAI8026686.1SODIUM/CALCIUM EXCHANGER
CAI8026687.1SODIUM/CALCIUM EXCHANGER
CAI8026685.1SODIUM/CALCIUM EXCHANGER
CAI8026684.1SODIUM/CALCIUM EXCHANGER
CAI8026683.1SODIUM/CALCIUM EXCHANGER
CAI8026682.1SODIUM/CALCIUM EXCHANGER
CAI8026681.1SODIUM/CALCIUM EXCHANGER
CAI8026680.1SODIUM/CALCIUM EXCHANGER
CAI8026679.1SODIUM/CALCIUM EXCHANGER
CAI8026693.1SODIUM/CALCIUM EXCHANGER
CAI8026694.1SODIUM/CALCIUM EXCHANGER
CAI8026678.1
CAI8026695.1
CAI8026696.1
CAI8026698.1
CAI8026697.1
CAI8026701.1
CAI8026700.1
CAI8026699.1
CAI8026702.1
CAI8026703.1
CAI8026704.1
CAI8026706.1
CAI8026705.1
CAI8026708.1WD REPEAT-CONTAINING PROTEIN 61
CAI8026707.1
CAI8026713.1
CAI8026709.1
CAI8026712.1
CAI8026711.1
CAI8026710.1
CAI8026717.1TRIFUNCTIONAL ENZYME SUBUNIT ALPHA
CAI8026716.1TRIFUNCTIONAL ENZYME SUBUNIT ALPHA
CAI8026715.1TRIFUNCTIONAL ENZYME SUBUNIT ALPHA
CAI8026714.1
CAI8026719.1TRIFUNCTIONAL ENZYME SUBUNIT ALPHA
CAI8026718.1TRIFUNCTIONAL ENZYME SUBUNIT ALPHA
CAI8026720.1TRIFUNCTIONAL ENZYME SUBUNIT ALPHA
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