About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_030890-T1ACROSIN-RELATED
OS493_030891-T1
OS493_030894-T1
OS493_030895-T1
OS493_030896-T1EXPRESSED PROTEIN
OS493_030897-T1
OS493_030898-T1
OS493_030899-T1
OS493_030900-T1DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER
OS493_030901-T1DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER
OS493_030902-T1PROTEIN FAM167A
OS493_030903-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_030904-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_030905-T1SPOT14 FAMILY MEMBER
OS493_030906-T1
OS493_030907-T1
OS493_030908-T1
OS493_030909-T1
OS493_030910-T1
OS493_030911-T1GLUTATHIONE S-TRANSFERASE
OS493_030912-T1GLUTATHIONE S-TRANSFERASE
OS493_030913-T1GLUTATHIONE S-TRANSFERASE
OS493_030914-T1
OS493_030915-T1GLUTATHIONE S-TRANSFERASE
OS493_030916-T1GLUTATHIONE S-TRANSFERASE
OS493_030917-T1GLUTATHIONE S-TRANSFERASE
OS493_030918-T1GLUTATHIONE S-TRANSFERASE
OS493_030919-T1GLUTATHIONE S-TRANSFERASE
OS493_030920-T1GLUTATHIONE S-TRANSFERASE
OS493_030921-T1
OS493_030922-T1
OS493_030923-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
OS493_030924-T1
OS493_030925-T1
OS493_030926-T1
OS493_030927-T1
OS493_030928-T1
OS493_030929-T1
OS493_030930-T1IONOTROPIC GLUTAMATE RECEPTOR
OS493_030931-T1IONOTROPIC GLUTAMATE RECEPTOR
OS493_030932-T1PROTEIN CBG23806
OS493_030933-T1
OS493_030934-T1GATA-TYPE ZINC FINGER PROTEIN 1
OS493_030935-T1SOX TRANSCRIPTION FACTOR
OS493_030936-T1COMPLEMENT COMPONENT C6
OS493_030938-T1
OS493_030939-T1
OS493_030940-T1
OS493_030941-T1
OS493_030942-T1UNCHARACTERIZED
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