About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_59363-0.6ATP SYNTHASE
Bpl_scaf_59371-0.2
Bpl_scaf_59371-0.3
Bpl_scaf_59372-0.11UNCHARACTERIZED
Bpl_scaf_59372-0.3ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Bpl_scaf_59372-1.5ETS
Bpl_scaf_59372-3.8
Bpl_scaf_59372-4.12
Bpl_scaf_59372-4.18
Bpl_scaf_59372-4.9G PROTEIN-COUPLED RECEPTOR 157-RELATED
Bpl_scaf_59372-6.32FATTY ACID SYNTHASE
Bpl_scaf_59372-6.35VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_59372-6.41MORN REPEAT-CONTAINING PROTEIN 2
Bpl_scaf_59372-6.42LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Bpl_scaf_59372-6.9
Bpl_scaf_59383-0.21DESMOGLEIN FAMILY MEMBER
Bpl_scaf_59383-0.22CADHERIN-23
Bpl_scaf_59383-0.24VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Bpl_scaf_59390-0.11
Bpl_scaf_59390-0.12POLYCYSTIN FAMILY MEMBER
Bpl_scaf_59390-0.17
Bpl_scaf_59390-0.20
Bpl_scaf_59401-0.11
Bpl_scaf_59401-0.12
Bpl_scaf_59401-0.13
Bpl_scaf_59401-0.14
Bpl_scaf_59401-0.17
Bpl_scaf_59401-0.30
Bpl_scaf_59401-0.31SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_59401-0.33
Bpl_scaf_59401-0.36
Bpl_scaf_59401-0.38AGAP005574-PA
Bpl_scaf_59401-0.39
Bpl_scaf_59401-0.8
Bpl_scaf_59409-0.11VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Bpl_scaf_59409-0.13UBIQUITIN-CONJUGATING ENZYME E2
Bpl_scaf_59409-0.19RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
Bpl_scaf_5941-0.19
Bpl_scaf_5941-0.24F-BOX ONLY PROTEIN
Bpl_scaf_5941-0.26CYTOKINE RECEPTOR
Bpl_scaf_5941-0.27CYTOKINE RECEPTOR
Bpl_scaf_5941-0.28
Bpl_scaf_5941-0.4
Bpl_scaf_5941-0.5
Bpl_scaf_59414-0.2
Bpl_scaf_59414-0.5NNMT/PNMT/TEMT FAMILY MEMBER
Bpl_scaf_59414-1.4NNMT/PNMT/TEMT FAMILY MEMBER
Bpl_scaf_59414-1.7NNMT/PNMT/TEMT FAMILY MEMBER
Bpl_scaf_59427-0.1
Bpl_scaf_59427-1.11LEUCINE RICH REPEAT FAMILY PROTEIN
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