About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_59194-0.9PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
Bpl_scaf_59203-0.2
Bpl_scaf_59203-0.3RHO FAMILY GTPASE
Bpl_scaf_59204-0.3TELO2-INTERACTING PROTEIN 2
Bpl_scaf_59204-0.4HEAT SHOCK PROTEIN 70KDA
Bpl_scaf_59213-0.6
Bpl_scaf_59213-0.7
Bpl_scaf_59225-0.0
Bpl_scaf_59225-0.1
Bpl_scaf_59225-0.3
Bpl_scaf_59230-0.6
Bpl_scaf_59230-0.7
Bpl_scaf_59237-0.2
Bpl_scaf_59237-0.6
Bpl_scaf_59245-0.3
Bpl_scaf_59255-0.13SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
Bpl_scaf_59262-0.2ATP-DEPENDENT DNA HELICASE
Bpl_scaf_59276-0.7
Bpl_scaf_59276-0.8LD24721P
Bpl_scaf_59288-0.0
Bpl_scaf_59306-0.10
Bpl_scaf_59306-0.13
Bpl_scaf_59306-0.14BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 1
Bpl_scaf_59306-0.8INHIBITOR OF APOPTOSIS
Bpl_scaf_59311-0.13
Bpl_scaf_59311-0.2
Bpl_scaf_59311-0.26
Bpl_scaf_59311-0.3RHO FAMILY GTPASE
Bpl_scaf_59311-0.5
Bpl_scaf_59311-0.7DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_59311-0.8DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_59317-0.12NECTIN-RELATED
Bpl_scaf_59317-0.7CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_59317-0.8
Bpl_scaf_59317-0.9
Bpl_scaf_5932-0.14GTPASE, IMAP FAMILY MEMBER-RELATED
Bpl_scaf_5932-0.15GTPASE, IMAP FAMILY MEMBER-RELATED
Bpl_scaf_5932-0.25
Bpl_scaf_5932-0.27PUTATIVE-RELATED
Bpl_scaf_59331-0.15
Bpl_scaf_59331-0.9BONUS, ISOFORM C-RELATED
Bpl_scaf_59343-0.10PROTEIN CBG05349
Bpl_scaf_59343-0.17ANILLIN/RHOTEKIN RTKN
Bpl_scaf_59343-0.8ACYLOXYACYL HYDROLASE
Bpl_scaf_59352-0.2PROTEIN CBG10425
Bpl_scaf_59360-0.0
Bpl_scaf_59360-0.21APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_59360-0.22APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_59360-0.24DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Bpl_scaf_59360-0.26
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