About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_025408-T1SI:CH211-161H7.5-RELATED
OS493_025409-T1DEDICATOR OF CYTOKINESIS
OS493_025410-T1
OS493_025411-T1DEDICATOR OF CYTOKINESIS
OS493_025412-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_025413-T1PR DOMAIN ZINC FINGER PROTEIN
OS493_025414-T1ADDUCIN
OS493_025415-T1ANCIENT UBIQUITOUS PROTEIN
OS493_025416-T1L-SERYL-TRNA(SEC) KINASE
OS493_025417-T1VACUOLAR ATP SYNTHASE SUBUNIT H
OS493_025418-T1RHOMBOID PROTEASE
OS493_025419-T1
OS493_025420-T1
OS493_025421-T1
OS493_025422-T1MOLTING PROTEIN MLT-4
OS493_025423-T1MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
OS493_025424-T1STAGA COMPLEX 65 SUBUNIT GAMMA
OS493_025425-T1NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58
OS493_025426-T1NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58
OS493_025427-T1FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED
OS493_025428-T1LEUCINE AMINOPEPTIDASE-RELATED
OS493_025429-T1
OS493_025430-T1TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT BIT61-RELATED
OS493_025431-T1UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED
OS493_025432-T1METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE
OS493_025433-T1ERYTHROID DIFFERENTIATION-RELATED FACTOR 1
OS493_025434-T1ERYTHROID DIFFERENTIATION-RELATED FACTOR 1
OS493_025435-T1ERYTHROID DIFFERENTIATION-RELATED FACTOR 1
OS493_025436-T1
OS493_025437-T1ZINC FINGER PROTEIN
OS493_025438-T1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
OS493_025439-T1
OS493_025440-T1METHYLTRANSFERASE
OS493_025441-T1
OS493_025442-T1SMC5-SMC6 COMPLEX LOCALIZATION FACTOR 2
OS493_025443-T1SMC5-SMC6 COMPLEX LOCALIZATION FACTOR 2
OS493_025444-T1MICROTUBULE-ASSOCIATED PROTEIN 9
OS493_025445-T1
OS493_025446-T1RCC1 DOMAIN-CONTAINING PROTEIN 1
OS493_025447-T1
OS493_025448-T1
OS493_025449-T1BASIGIN RELATED
OS493_025450-T1BASIGIN RELATED
OS493_025451-T1
OS493_025452-T1
OS493_025453-T1ENOLASE
OS493_025454-T1
OS493_025455-T1ACROSIN-RELATED
OS493_025456-T1TRYPTASE-RELATED
OS493_025457-T1
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